Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., chemotaxis protein CheA from Pseudomonas fluorescens FW300-N2C3

 Score =  267 bits (682), Expect = 2e-75
 Identities = 161/462 (34%), Positives = 248/462 (53%), Gaps = 30/462 (6%)

Query: 323 VASSPVSSDAKASAEASAPSTKPAAKPVAKPAAAKPAVAKEEPAKAPAPAAVKDSDESRE 382
           VA   V+ +A  +  +   ST  A  PV    A +    K   AK   PA          
Sbjct: 267 VACGSVTREAWLAGSSPDESTTVAVAPVVPDQATRDDATKSRVAKEARPAE--------- 317

Query: 383 VAAAGGAKKAQTESTVRVDTSTLDTIMNMVGELVLVRNRLLSLGLNSNDEEMSKAVANLD 442
                        + +RVD   LD ++N+VGEL++         + S   E+ +  ++L 
Sbjct: 318 ------------GNLIRVDAGKLDQLINLVGELIIAGAGANLGAIQSGIGELIETTSSLS 365

Query: 443 VVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALA 502
            +  +++   +  RM  I   F RF RVVRD+++ L K+I L++ G ET+LDK +VE + 
Sbjct: 366 RLVEEVRDCALTLRMVQIGGTFNRFQRVVRDVSKELGKDIALQVLGAETELDKTVVERIG 425

Query: 503 DPLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLAIVDDGAGMDPDKLR 562
           DPL HLVRN++DHGIE    R   GK   G V L+A  E + I + + DDG G++  ++ 
Sbjct: 426 DPLTHLVRNAMDHGIEASQLRRDRGKPEQGTVRLNAYHEANSIVIEVSDDGGGLNKQRIL 485

Query: 563 GIAVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVGMDVVKTAINTLNGS 622
             A++RG++ E    +L + +  NLIF PGFS+ ++++++SGRGVGMDVVK  I  L GS
Sbjct: 486 AKAMERGLVAE--GQQLADGDILNLIFEPGFSTADQVSNLSGRGVGMDVVKRNIVALRGS 543

Query: 623 IDIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFALPLASVNEIFHLDLRRTNVVDGQ 682
           ++++S  G GT + I++PLTLAI+   ++GV    + +PL  V E   L    T+    Q
Sbjct: 544 VNLESEEGVGTTVRIRLPLTLAIIDGFLIGVGNASYVVPLDLVEECIELS---TDDYGNQ 600

Query: 683 LTIIVREKSIPLFYLQNWLAPKKGKVQLRQGHGHVVIVQIGSQRVGLVVDTLIGQEEVVI 742
             + +R   +P+  L+   A      +   G  ++V+V     RVGLVVD L+G+ + VI
Sbjct: 601 EFLDLRGSVLPVLRLREMFAID----EPNHGRENIVVVHYAGMRVGLVVDQLLGEFQTVI 656

Query: 743 KPLDKLLQGTPGMSGATITSDGHIALILDVPDLLKQYAAASR 784
           KPL K+     G+ G TI  +G +ALILD+P LL Q  +  +
Sbjct: 657 KPLGKIFGTAHGLGGFTILGNGAVALILDIPKLLGQVVSRQK 698



 Score = 72.8 bits (177), Expect = 6e-17
 Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 9/147 (6%)

Query: 7   EDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVET 66
           +D+LQ F+ E+ E+L L+ + L+++E  P+D D +NA+FR  HT+KG AG    + +V  
Sbjct: 4   DDVLQTFIAESQELLLLMEDALLQIEQAPDDVDTINALFRVAHTIKGSAGLFGFTPIVAF 63

Query: 67  CHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPE-------L 119
            H AE+V D +R  +  V  SL    L+  D +      +     LQ    E       L
Sbjct: 64  THVAESVLDRVRGHELRVDESLSALFLEVRDHLCTLIELLASHGDLQGMTTEHERQGAAL 123

Query: 120 LDELHRLSKPASEDEDEAAEAHFDEPE 146
           ++ L+R  +  +  E E ++   + P+
Sbjct: 124 VERLNRYLE--NRHEPELSQVPIEPPQ 148