Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 723 a.a., Chemotaxis protein histidine kinase and related kinases from Pseudomonas stutzeri RCH2

 Score =  811 bits (2096), Expect = 0.0
 Identities = 457/783 (58%), Positives = 551/783 (70%), Gaps = 66/783 (8%)

Query: 1   MSYELDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLAL 60
           MS++ DE+ILQDFLVEAGEILELLSEQLVELE++P+D  LLNAIFRGFHTVKGGAGFL L
Sbjct: 1   MSFDADEEILQDFLVEAGEILELLSEQLVELESSPDDMALLNAIFRGFHTVKGGAGFLQL 60

Query: 61  SELVETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELL 120
            ELVE CH AENVFDILR G+R V   LMD +L+ALD+VNE F  V+ER    PA  ELL
Sbjct: 61  HELVECCHIAENVFDILRKGERRVDSELMDVVLQALDSVNEMFGQVRERVEPTPASRELL 120

Query: 121 DELHRLSKPASEDEDEAA--EAHFDEPEEELVEEIIEEVVEDVVEEAVPNVETEVTASAS 178
             L RL++PAS DE       A   EP+ E V+   E+++      AV + ++E  A+  
Sbjct: 121 AALARLAEPASADEPAVPMEPAPVAEPQVEAVDAEFEQMLA-----AVQSSDSEPAAAQV 175

Query: 179 SGVIDKGSIDDINEDEFEKLLDELHGKGKAPGAQSPQAPASAPAKAASVTNSDLNGDITD 238
           SG       D+I +DEFE LLD+LHGKG+          A++ A    V  +  + +ITD
Sbjct: 176 SG-----GGDEITDDEFESLLDQLHGKGQF------SVSAASAAPEPEVVVAPASDEITD 224

Query: 239 DEFEKLLDQLHGKGKGPSIETAAPAAPVTPSTPKATETPKPAAAKSAPGGDDLMTDEEFE 298
           DEFE LLDQLHGKGK   +           ST     TP  AA  S     D +TD+EFE
Sbjct: 225 DEFEALLDQLHGKGKFEPVG----------STSTEPATPAAAAPASNTSASDEITDDEFE 274

Query: 299 KLLDELHGSGK-GPSVEELEMATRPVASSPVSSDAKASAEASAPSTKPAAKPVAKPAAAK 357
            LLD+LHG GK  P+V E+                 A A  S P  KP A   A PA A 
Sbjct: 275 ALLDQLHGKGKFEPAVAEV-----------------APAVPSKPEPKPEAARAA-PAKAA 316

Query: 358 PAVAKEEPAKAPAPAAVKDSDESREVAAAGGAKKAQTESTVRVDTSTLDTIMNMVGELVL 417
           PA A  +PA   A  A                  A+ E+TVRVDT+ LD IMNMVGELVL
Sbjct: 317 PAAAVSKPAAVVAEKA-----------------PAEAETTVRVDTARLDEIMNMVGELVL 359

Query: 418 VRNRLLSLGLNSNDEEMSKAVANLDVVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARS 477
           VRNRL+ LG NS DE M+KAV+NLDVVTADLQ AVMKTRMQPIKKVFGRFPR+VRDLARS
Sbjct: 360 VRNRLVRLGSNSGDEAMAKAVSNLDVVTADLQSAVMKTRMQPIKKVFGRFPRLVRDLARS 419

Query: 478 LNKEIDLELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILS 537
           L KEI+LEL GEETDLDKNLVEALADPL+HLVRN+VDHGIEMP+ER   GK RTG+V+LS
Sbjct: 420 LKKEINLELVGEETDLDKNLVEALADPLVHLVRNAVDHGIEMPEEREAAGKPRTGRVVLS 479

Query: 538 ASQEGDHIQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIFMPGFSSKE 597
           A QEGDHI L I DDG GMD + LR  AV++G++++DAA+RL++ EC+NLIF PGFS+K 
Sbjct: 480 AEQEGDHILLIISDDGKGMDANVLRAKAVEKGMLEKDAADRLSDLECYNLIFAPGFSTKT 539

Query: 598 KITDISGRGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHP 657
           +I+D+SGRGVGMDVVKT I+ LNG++++ ST G+G+++ IKVPLTLAI+PTLMV +    
Sbjct: 540 EISDVSGRGVGMDVVKTKISQLNGTVNVFSTKGQGSRVVIKVPLTLAIMPTLMVMLGNQA 599

Query: 658 FALPLASVNEIFHLDLRRTNVVDGQLTIIVREKSIPLFYLQNWLAPKKGKVQLRQGHGHV 717
           FA PL +VNEIFHLDL RTNVVDGQ  +IVR+K++PLFYL+ WL     + + R+  GHV
Sbjct: 600 FAFPLVNVNEIFHLDLSRTNVVDGQEVVIVRDKALPLFYLKRWLIQSAAEEEQRE--GHV 657

Query: 718 VIVQIGSQRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIALILDVPDLLK 777
           VI+ +G+Q +G VVD L+GQEEVVIKPL K+LQGTPGMSGATIT DG IALILDVP +LK
Sbjct: 658 VILSVGNQSIGFVVDQLVGQEEVVIKPLGKMLQGTPGMSGATITGDGRIALILDVPSMLK 717

Query: 778 QYA 780
           +YA
Sbjct: 718 RYA 720