Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 928 a.a., CheA signal transduction histidine kinase from Synechococcus elongatus PCC 7942

 Score =  216 bits (550), Expect = 5e-60
 Identities = 199/813 (24%), Positives = 352/813 (43%), Gaps = 76/813 (9%)

Query: 1   MSYELDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLAL 60
           MS   D  +   FL E  E L+LL++ + ++E    D        R  H++KGGA  L  
Sbjct: 1   MSSTSDNVLRSLFLRETRENLQLLTQMIGQMEAGLPDAKTFADASRAAHSLKGGAALLKF 60

Query: 61  SELVETCHGAENVFDILRNGQR---HVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADP 117
               +   G E    +L   +     VS  L       L T  ++  A  E + + P + 
Sbjct: 61  ETFRQLAAGLETCLSLLSEAELPDYEVSLPLFQRAAALLITATDRIEAGVEEQAVVPEEG 120

Query: 118 E-LLDELHRLSKPASEDEDEAAEAHFDEPEEE-----LVEEIIEEVVEDVVEEAVPNVE- 170
             L+++L  L         E  +A    P ++      +E+++ +  E V+    P++E 
Sbjct: 121 NPLIEQLQVLQ--------EMLQAAVQVPPDQSAVTSTLEDLLTQDFETVLLPPTPDLEQ 172

Query: 171 -------------TEVTASASSGVIDKGSIDDINEDEFEKLLDELHGKGKAPGAQSPQAP 217
                        + +    S G  D+ +++D+N D    L D +    +          
Sbjct: 173 TLDQLLGDLEETPSPIAGQGSDG--DRPALEDLNFD----LEDWIEASEEESETVEIDIV 226

Query: 218 ASAPAKAASVTNSDLNGDITDDEFEKLLDQLHGKGKGPSIETAAPAAPVTPSTPKATETP 277
           A   A  A++       D+T    E+ L        G   +  +      P  P A    
Sbjct: 227 AQVKALEAAIA------DLTQHPHEQPLSL------GIKDDILSAVIQAAPRLPVALTLE 274

Query: 278 KPAAAKSAPGGDDLMTDEEFEKLLDELHGSGKGPSVEELEMATRPVASSPVSSDAKASAE 337
             A A++   G    T   FE+ L           V +L+  +  V    VS +   S +
Sbjct: 275 PVAKARTQDNGK---TPVVFEQTLRV--------PVRQLDNLSNLVGEIVVSRNTLESDQ 323

Query: 338 ASAPSTKPAAKPVAKPAAAKPAVAKEEPAKAPAPAAVKDSDESREVAAAGGAKKAQTEST 397
           +    T                  +E   ++    A+    +    + A G+  A T  T
Sbjct: 324 SHLRETLENLMLQVHQLGDLGERMRELYERSLLETALAARRQLVGSSTAAGSAGASTFPT 383

Query: 398 VRVDTSTLDTI-------MNMVGELVLVRNRLLSLGLNSNDEEMSKAVANLDVVTADLQG 450
            + D   LD           M+  LV +R     +    N E   +   N   +T  LQ 
Sbjct: 384 EQFDDLELDRFSGFHSISQEMMELLVRLREAASDIDFMVN-EPFDQLTRNFQQITLQLQS 442

Query: 451 AVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALADPLIHLVR 510
            + +TRM P   +  + PR VR+++R   K   LE+ G++  +DK +++ L  P+ HL+ 
Sbjct: 443 ELNQTRMVPFSDLTDQLPRAVREISRRCGKGARLEIEGKDILIDKMILQKLQAPMTHLIN 502

Query: 511 NSVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRGIAVKRGI 570
           N++ HGIE  + R    KS  G +++ AS +G+   + + DDGAG+D ++++  A+ RG+
Sbjct: 503 NALSHGIETAEIRQYRNKSAEGTLVVRASLQGNRTLITVTDDGAGIDAEQVKLKALARGL 562

Query: 571 MDEDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVGMDVVKTAINTLNGSIDIDSTMG 630
           +  + A  +  +E + L+F PGFS++++  +++GRGVG+DVV+ A++ + G I +DS +G
Sbjct: 563 ITPEEAAGMRVREIYELLFRPGFSTRDQADELAGRGVGLDVVRRALHEIQGEIVVDSELG 622

Query: 631 KGTKITIKVPLTLAILPTLMVGVAGHPFALPLASVNEIFHLDLRRTNV-VDGQLTIIVRE 689
           KGT  T ++PLTL+I   L         A P+ SV E+  +  +R  +   GQL +    
Sbjct: 623 KGTTFTFRLPLTLSITKALTCLHERARLAFPMDSVEEMLDIPQQRLAMDPQGQLRLDWHN 682

Query: 690 KSIPLFYLQNWLAPKKGKVQLR-------QGHGHVVIVQIGSQRVGLVVDTLIGQEEVVI 742
            S+P+F L + L       + R        G   +V+++  ++ + +  D + G+ E+VI
Sbjct: 683 LSLPVFPLSSLLDFHLPFGRSRYYNSLGDDGVVSIVVLRNDNEYLAVQTDQIEGEREIVI 742

Query: 743 KPLDKLLQGTPGMSGATITSDGHIALILDVPDL 775
           K ++  +    G+ G T+ SDG +  I+DV +L
Sbjct: 743 KQIEGPIAKPLGILGITVRSDGQVMPIVDVLEL 775