Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 708 a.a., Sensor histidine kinase from Sinorhizobium meliloti 1021

 Score =  175 bits (443), Expect = 9e-48
 Identities = 124/476 (26%), Positives = 218/476 (45%), Gaps = 57/476 (11%)

Query: 355 AAKPAVAKEEPAKAPAPAAVKDSDES-REVAAAG---GAKKAQ----------------T 394
           A + A    E  + P+PA  +D  E  + VA AG   G K+A                 T
Sbjct: 103 AIRDAANLLESGEIPSPAHGQDVVEKLKAVATAGSDDGLKEAHHHPPMAEPEIAIRATDT 162

Query: 395 ESTVRVDTSTLDTIMNMVGEL-----VLVRNRLLSLGLNSNDEEMSKAVANLDVVTADLQ 449
           + ++RV  + LD ++   GE+     V+ R+   +  L     +M    ++     A ++
Sbjct: 163 DGSMRVSAARLDALLYRSGEMLTFNAVMRRHAEQASSLREEARKMRAPGSDPTGQVASVE 222

Query: 450 GAVMK-------------------------TRMQPIKKVFGRFPRVVRDLARSLNKEIDL 484
           G + +                          R QP  +      R+VRD+A +  K  +L
Sbjct: 223 GGLRQLAAFLRQDVRLMQSAVTALDEEIRLARTQPFAEACKGLGRIVRDVAAASGKRAEL 282

Query: 485 ELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQEGDH 544
           E+ G E ++D+++V AL D L HLVRN+V HGI+ P+ER   G+   G++++SA+  G+ 
Sbjct: 283 EISGGELEVDRSIVSALQDSLRHLVRNAVAHGIQTPEERRTAGRPEKGRILVSAAMRGNR 342

Query: 545 IQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKITDISG 604
           +++ + DDG G++      +A+      E    +    +    +F PG S+   +T +SG
Sbjct: 343 MEVRVEDDGRGLN------LALLSAATGESTHGKQAEADILRRVFEPGVSTSATVTSLSG 396

Query: 605 RGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFALPLAS 664
           RG+G+D+VK  +  L G++D+      G   T+ +PLTLA +  L V   GH F +   S
Sbjct: 397 RGIGLDIVKRNVEKLRGAVDVSQVPTGGAAFTLTLPLTLATVRVLEVLAGGHVFTIDTTS 456

Query: 665 VNEIFHLDLRRTNVVDGQLTIIVREKSIPLFYLQNWLAPKKGKVQLRQGHGHVVIVQIGS 724
           V  +  +D     +++G+  +      +P   +  WL  +  +    +     V+V   S
Sbjct: 457 VQRVIRIDRGDFTLIEGRNFVRTPAGPMPFVDVSLWLRLQPNRSPASE-TTPAVVVDSPS 515

Query: 725 QRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIALILDVPDLLKQYA 780
               ++VD + G++E++ + L   L      S   +  DG IAL+L+V  L +  A
Sbjct: 516 GSTAVLVDEITGEQELLARSLGPRLANVRRYSRGMVLPDGRIALLLNVAALAEAAA 571



 Score = 52.4 bits (124), Expect = 9e-11
 Identities = 39/149 (26%), Positives = 65/149 (43%), Gaps = 6/149 (4%)

Query: 4   ELDEDILQDFLVEAGEILELLSEQLVELENNPE---DRDLLNAIFRGFHTVKGGAGFLAL 60
           ELD  +L  F  E  E    +   ++ +E + +    R L   + RG H++KG AG L +
Sbjct: 6   ELDPGLLTMFTQEVRERASEMENAVLAIEASGDADRKRHLQEQLLRGAHSLKGAAGLLQV 65

Query: 61  SELVETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELL 120
             +   CH  E +  +  N    +  S +D +L A D + +    ++  E   PA  +  
Sbjct: 66  RGVETICHWMEEILSMAANVGLVLERSRLDLLLSAADAIRDAANLLESGEIPSPAHGQ-- 123

Query: 121 DELHRLSKPASEDEDEA-AEAHFDEPEEE 148
           D + +L   A+   D+   EAH   P  E
Sbjct: 124 DVVEKLKAVATAGSDDGLKEAHHHPPMAE 152