Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 693 a.a., CheA Signal Transduction Histidine Kinases (STHK) (NCBI) from Rhodospirillum rubrum S1H

 Score =  286 bits (732), Expect = 3e-81
 Identities = 160/389 (41%), Positives = 233/389 (59%), Gaps = 12/389 (3%)

Query: 392 AQTESTVRVDTSTLDTIMNMVGELVLVRNRLLSLGLNSNDEEMSKAVANLDVVTADLQGA 451
           A+   ++RV    LD +M+ VGELV+ ++RL  +  + ND ++      ++ +  +L+  
Sbjct: 301 AKGADSIRVPAERLDELMDRVGELVIAQSRLTQVAASINDMQVKAIAEEIERLAHELRDT 360

Query: 452 VMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALADPLIHLVRN 511
            M  RM PI  +FGRF R+V DLA  L K+I+L   GEET+LDK ++E L DPLIHL+RN
Sbjct: 361 TMGVRMVPISSLFGRFRRLVHDLAHDLGKQIELTTFGEETELDKTVIERLNDPLIHLIRN 420

Query: 512 SVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRGIAVKRGIM 571
           S+DHG+E P+ R + GK   G++ LSA   G  + ++I+DDG G+D  +++  A ++G++
Sbjct: 421 SIDHGLETPEGRKEAGKPPAGRITLSARHSGAEVLVSIIDDGRGLDRARIQARAEEQGLL 480

Query: 572 DEDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVGMDVVKTAINTLNGSIDIDSTMGK 631
                 +L++ + F +IF  GFS+ + +T +SGRGVGMDVVK  I  L G IDI ST GK
Sbjct: 481 APGV--KLSDNDLFQVIFQAGFSTAKVVTSLSGRGVGMDVVKRTIEGLRGKIDIASTPGK 538

Query: 632 GTKITIKVPLTLAILPTLMVGVAGHPFALPLASVNEIFHLDLRRTNVVDGQLTIIVREKS 691
           GT++T+++PLTLAI+  L+V V    + LPL++V E   L         G+  + +R   
Sbjct: 539 GTELTLRLPLTLAIIDGLLVRVGKARYVLPLSAVEECVELSAEEDGRSRGRSFLNIRGDL 598

Query: 692 IPLFYLQNWL---APKKGKVQLRQGHGHVVIVQIGSQRVGLVVDTLIGQEEVVIKPLDKL 748
           +P   L+      AP          +  VVIV  G  RVGLVVD +IG  + VIK L KL
Sbjct: 599 VPFLRLRELFQVSAP-------ADPYQKVVIVSSGEFRVGLVVDQVIGNHQTVIKSLSKL 651

Query: 749 LQGTPGMSGATITSDGHIALILDVPDLLK 777
                  SGATI  DG +ALILD+  L+K
Sbjct: 652 HADVETFSGATILGDGAVALILDIGHLVK 680



 Score = 63.2 bits (152), Expect = 5e-14
 Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 6/144 (4%)

Query: 8   DILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVETC 67
           D  + F  EA E+LE L + L++LE+ P+D DL+++ FR  HT+KG         +    
Sbjct: 5   DPSETFRQEAQELLEQLEQALLDLEHAPDDGDLIDSAFRALHTIKGSGSMFGFDAVAAFT 64

Query: 68  HGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELLDELHRL- 126
           H  E  FD++R G+   S  L+   L A D +  +    Q   P       +L +L  + 
Sbjct: 65  HHVETAFDLVRKGKVTPSRELIAVALAAKDRM--RLLIEQPETPESAEGDAILRDLKAIV 122

Query: 127 ---SKPASEDEDEAAEAHFDEPEE 147
                P++ +  +A  A  ++P E
Sbjct: 123 DASDLPSAGEGGDAPVAAREQPAE 146