Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 746 a.a., CheA signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  860 bits (2221), Expect = 0.0
 Identities = 479/789 (60%), Positives = 576/789 (73%), Gaps = 56/789 (7%)

Query: 1   MSYELDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLAL 60
           MS+++DE+ILQDFL+EAGEILELLSEQLV LENNP+D +LLNAIFRGFHTVKGGAGFL+L
Sbjct: 1   MSFDVDEEILQDFLIEAGEILELLSEQLVALENNPDDTELLNAIFRGFHTVKGGAGFLSL 60

Query: 61  SELVETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELL 120
           + +V+ CH AEN FD+LR G+R VS  LMD +L+A+DT+N  F   Q      PAD  LL
Sbjct: 61  TPMVDVCHEAENTFDLLRTGKRSVSAELMDIILQAVDTINSMFAETQAGVEQSPADEGLL 120

Query: 121 DELHRLSKPA---SEDEDEAAEAHFDEPEEELVEEIIEEVVE--DV-VEEAVPNVETEVT 174
             L  LS      SE    + EA  + P E  VE   ++ +E  D+ +++ V   +  V+
Sbjct: 121 ANLKLLSSGGLLPSEQGGASVEAVAETPAEPAVEIPADDGIELFDMPLDDGVELFDEPVS 180

Query: 175 ASASSGVIDKGSIDDINEDEFEKLLDELHGKGKAPGAQSPQAPASAPAKAASVTNSDLNG 234
            +  + +  +G ID+I+E EFE LLD LHG GK P +       +APA  A +  SD + 
Sbjct: 181 DAPVTSIAGEGDIDEIDESEFEALLDALHGSGKGPSS-------TAPAGVAPIQASD-SD 232

Query: 235 DITDDEFEKLLDQLHGKGKGPSIETAAPAAPVTPSTPKATETPKPAAAKSAPGGDDLMTD 294
           DITDDEFE LLD+LHG GK       AP+AP+        + P+P    S P   D +TD
Sbjct: 233 DITDDEFESLLDELHGSGK-----FQAPSAPIA-------KVPEPT---SPPVDADEITD 277

Query: 295 EEFEKLLDELHGSGKGPSVEELEMATRPVASSPVSSDAKASAEASAPSTKPAAKPVAKPA 354
           +EFEKLLDELHG+G GP  E          S PV+S AKA A        PA   VA PA
Sbjct: 278 DEFEKLLDELHGAGAGPGSE---------TSKPVASAAKAPAA-------PAPNKVATPA 321

Query: 355 AAKPAVAKEEPAKAPAPAAVKDSDESREVAAAGGAKKAQTESTVRVDTSTLDTIMNMVGE 414
              P+  K +P + PAP  V    + +  A A      Q E+TVRVDT+ LD IMNMVGE
Sbjct: 322 ---PSSVKSQPVEVPAPKPVV---KEKAAAKAPATNMPQAETTVRVDTARLDQIMNMVGE 375

Query: 415 LVLVRNRLLSLGLNSNDEEMSKAVANLDVVTADLQGAVMKTRMQPIKKVFGRFPRVVRDL 474
           LVLVRNRLLSLG++ +DE+MSKA+ANLD+VTADLQGAVMKTRMQPIKKVFGRFPRVVRDL
Sbjct: 376 LVLVRNRLLSLGISRDDEDMSKALANLDLVTADLQGAVMKTRMQPIKKVFGRFPRVVRDL 435

Query: 475 ARSLNKEIDLELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKSRTGKV 534
           ARSLNKEIDL + GE+TDLDKNLVEALADPL+HLVRNSVDHGIEMPDER  NGKSRTG +
Sbjct: 436 ARSLNKEIDLRMIGEDTDLDKNLVEALADPLVHLVRNSVDHGIEMPDEREANGKSRTGTI 495

Query: 535 ILSASQEGDHIQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIFMPGFS 594
            LSASQEGDHI L I DDGAGMDP+KL+ IA+KRG++DEDAA R++++E +NLIF PGFS
Sbjct: 496 TLSASQEGDHILLKIEDDGAGMDPEKLKQIAIKRGVLDEDAAARMSDEEAYNLIFAPGFS 555

Query: 595 SKEKITDISGRGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTLMVGVA 654
           +K +I+DISGRGVGMDVVKT I  LNG++ IDS  GKGT + IKVPLTLAI+PTLMV VA
Sbjct: 556 TKVEISDISGRGVGMDVVKTRITQLNGTVHIDSLKGKGTCLEIKVPLTLAIMPTLMVEVA 615

Query: 655 GHPFALPLASVNEIFHLDLRRTNVVDGQLTIIVREKSIPLFYLQNWLAPKKGKVQLRQG- 713
              FALPL+SV+EIFHLDL +TNVVDGQLT+IVREK++PLFYL++WL+ K   V  + G 
Sbjct: 616 QQVFALPLSSVSEIFHLDLTKTNVVDGQLTVIVREKAVPLFYLEHWLSRK--AVSFKHGD 673

Query: 714 --HGHVVIVQIGSQRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIALILD 771
             HGHVVIVQ+G+ ++G VVD+LIGQEEVVIKPL  LL GTPGM+GATITSDG IALILD
Sbjct: 674 KQHGHVVIVQLGTMQIGFVVDSLIGQEEVVIKPLGTLLHGTPGMAGATITSDGGIALILD 733

Query: 772 VPDLLKQYA 780
           VP LLK YA
Sbjct: 734 VPGLLKHYA 742