Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 724 a.a., CheA signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  296 bits (757), Expect = 3e-84
 Identities = 172/429 (40%), Positives = 257/429 (59%), Gaps = 20/429 (4%)

Query: 350 VAKPAAAKPAVAKEEPAKAPAPAAVKDSDESREVAAAGGAKKAQTESTVRVDTSTLDTIM 409
           V  P     A+A+++        AV+   +SR+  +     +  + +++RV  S LD ++
Sbjct: 294 VVPPERVDAALAEQQ--------AVRTIRQSRDKESTA---RDDSGASIRVAASKLDFLV 342

Query: 410 NMVGELVLVRNRLLSLGLNSNDEEMSKAVANLDVVTADLQGAVMKTRMQPIKKVFGRFPR 469
           ++VGELV+V+ +L       +D  +   V  L+ ++ +L+   +  RM PI   F +F R
Sbjct: 343 DLVGELVIVQAQLSQAAHLRSDPGLLGLVEELERLSDELRDTTLGIRMLPIGTTFSKFRR 402

Query: 470 VVRDLARSLNKEIDLELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKS 529
           +VRDL+  L K+++L   G ET+LDK ++E L DPL+H +RNS+DHG+E PD RA  GK 
Sbjct: 403 LVRDLSAELGKDVELVTLGGETELDKTVIERLGDPLVHCLRNSMDHGVESPDVRAAAGKP 462

Query: 530 RTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIF 589
           RTG V LSA+  G  + + I DDGAG+DP ++  IA +RG++  D    L  +E   LIF
Sbjct: 463 RTGTVTLSAAHAGGEVLITIADDGAGIDPARVLEIARRRGVIAPDV--ELPAREAIELIF 520

Query: 590 MPGFSSKEKITDISGRGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTL 649
            PGFS+ EK+T +SGRGVGMDVVK +I  L G I++DS +G+GT +TI++PLTLAI+  L
Sbjct: 521 APGFSTAEKVTSVSGRGVGMDVVKRSIEALRGRIELDSAVGRGTTLTIRLPLTLAIIDGL 580

Query: 650 MVGVAGHPFALPLASVNEIFHLDLRRTNVVDGQLTII-VREKSIPLFYLQNWLAPKKGKV 708
            V V G  + +PL  V E    +    +  DG+  II +R + +P   L+   A      
Sbjct: 581 QVLVGGESYVIPLNHVEEC--AEHSTPSSADGRQRIINLRGEIVPYIRLRELFASSGPAP 638

Query: 709 QLRQGHGHVVIVQIGSQRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIAL 768
            + Q    VV+V     R GLVVD ++G+ + VIK L ++ +  PG+SGATI  DG +AL
Sbjct: 639 AIEQ----VVVVDAQGSRFGLVVDCVVGEHQTVIKSLGRIYKDVPGISGATIKGDGSMAL 694

Query: 769 ILDVPDLLK 777
           ILDVP L++
Sbjct: 695 ILDVPGLVQ 703



 Score = 69.3 bits (168), Expect = 7e-16
 Identities = 33/87 (37%), Positives = 49/87 (56%)

Query: 13 FLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVETCHGAEN 72
          F+ EA ++L  L   L+ELE  P+DRDL+  +FR  HT+KG        ++    H  E 
Sbjct: 12 FIEEAQDLLAELETALLELEAQPDDRDLVARVFRAMHTIKGSGAMFGFDDIAHFTHDVET 71

Query: 73 VFDILRNGQRHVSPSLMDTMLKALDTV 99
          VFD +RNG+  V+  L+D  L + D +
Sbjct: 72 VFDRVRNGEVPVTRQLLDLTLASRDHI 98