Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 920 a.a., chemotaxis protein CheA from Methanococcus maripaludis S2

 Score =  322 bits (824), Expect = 8e-92
 Identities = 165/407 (40%), Positives = 267/407 (65%), Gaps = 8/407 (1%)

Query: 374 VKDSDESREVAAAGGAKKAQTES-----TVRVDTSTLDTIMNMVGELVLVRNRLLSLGLN 428
           +KD+ + +    A   K+A+  S     TVRV+   LD +MN+VGE+V+ R     +   
Sbjct: 517 LKDNTKIKNTVDATSKKQAENSSSKKSQTVRVNIEKLDKLMNLVGEVVINRANFTQIATK 576

Query: 429 SNDEEMSKAVANLDVVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRG 488
            + +E+  AV  L+++  +LQ  VM  RM P+  VF RFPR VRD A++L+KEID E+ G
Sbjct: 577 YDLKELHNAVGRLNMLATELQEEVMGMRMIPVAFVFNRFPRTVRDTAKALDKEIDFEIEG 636

Query: 489 EETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLA 548
            + +LD+ +++ LA+PL HL+RNS+DHGIE  DER K GK   G + L A+++ D + + 
Sbjct: 637 SDIELDRTVLDELAEPLTHLIRNSLDHGIEHADERIKLGKPEKGILKLIATRQRDRVNII 696

Query: 549 IVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVG 608
           I DDG G+DP+ +R  A ++G+  ++ A +LT+ E  N+IF PGFS+ E ++D+SGRGVG
Sbjct: 697 IRDDGKGIDPEAMRKKAFEKGLYSKEEAEKLTDNEAVNVIFHPGFSTAEVVSDVSGRGVG 756

Query: 609 MDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFALPLASVNEI 668
           MDVV++ I +L GS+ ++S +GKGT+IT+ +PLT+AI+ TL++ +  H +ALPL SV ++
Sbjct: 757 MDVVRSKIESLGGSVTVNSEVGKGTEITLHLPLTMAIIQTLLIRLNEHIYALPLTSVLDV 816

Query: 669 FHLDLRRTNVVDGQLTIIVREKSIPLFYLQNWLAPKKGKVQLRQGHGHVVIVQIGSQRVG 728
             ++  +   ++GQ  II R   +P+ +L++ L              +VV+V+    +VG
Sbjct: 817 ISVEKEQIKNLEGQEAIIYRNHILPVIWLKDALNTSGFS---DSDDLYVVVVEKNKGKVG 873

Query: 729 LVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIALILDVPDL 775
           +++D +IG++E+V+KPL  +L+   G++GATI  DG +ALILD+ ++
Sbjct: 874 MILDEVIGRDEIVVKPLTGILKNINGLAGATILGDGRVALILDLNNI 920



 Score = 82.0 bits (201), Expect = 1e-19
 Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 3/152 (1%)

Query: 13  FLVEAGEILELLSEQLVELENNPEDRD-LLNAIFRGFHTVKGGAGFLALSELVETCHGAE 71
           F+ EA E L+ L++ +VELEN PED + ++N IFR  HT+KG A  L    +    H  E
Sbjct: 11  FMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFEHISSLTHHME 70

Query: 72  NVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELLDELHR--LSKP 129
           ++ D +R+G+  V+P ++D + K LD +      V + E     D + L E+ +    K 
Sbjct: 71  DILDYIRDGKIKVNPEIVDLLFKCLDALETMVSEVSDGEDTTSVDVDSLVEVIKSVKEKY 130

Query: 130 ASEDEDEAAEAHFDEPEEELVEEIIEEVVEDV 161
            S +  +     + +P E   +++ E+ V ++
Sbjct: 131 LSGENSKEDSLDYSDPNEVAKKQVEEKTVNNI 162