Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 920 a.a., chemotaxis protein CheA from Methanococcus maripaludis JJ

 Score =  324 bits (831), Expect = 1e-92
 Identities = 166/406 (40%), Positives = 267/406 (65%), Gaps = 8/406 (1%)

Query: 375 KDSDESREVAAAGGAKKAQTES-----TVRVDTSTLDTIMNMVGELVLVRNRLLSLGLNS 429
           KD+ + +    A   K+A+  S     TVRV+   LD +MN+VGE+V+ R     +    
Sbjct: 518 KDNTKIKNTVDATSKKQAENSSSKKSQTVRVNIEKLDKLMNLVGEVVINRANFTQIATKY 577

Query: 430 NDEEMSKAVANLDVVTADLQGAVMKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGE 489
           + +E+  AV  L+++  +LQ  VM  RM P+  VF RFPR VRD A++L+KEID E+ G 
Sbjct: 578 DLKELHNAVGRLNMLATELQEEVMGMRMIPVAFVFNRFPRTVRDTAKALDKEIDFEIEGS 637

Query: 490 ETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLAI 549
           + +LD+ +++ LA+PL HL+RNS+DHGIE  DER K GK   G + L A+++ D + + I
Sbjct: 638 DIELDRTVLDELAEPLTHLIRNSLDHGIEHADERIKLGKPEKGILKLIATRQRDRVNIII 697

Query: 550 VDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVGM 609
            DDG G+DPD +R  A ++G+  ++ A +LT+ E  N+IF+PGFS+ E ++D+SGRGVGM
Sbjct: 698 RDDGKGIDPDAMRKKAFEKGLYSKEEAEKLTDNEAVNVIFLPGFSTAEVVSDVSGRGVGM 757

Query: 610 DVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTLMVGVAGHPFALPLASVNEIF 669
           DVV++ I +L GS+ ++S +GKGT+IT+ +PLT+AI+ TL++ +  H +ALPL SV ++ 
Sbjct: 758 DVVRSKIESLGGSVTVNSEVGKGTEITLHLPLTMAIIQTLLIRLNEHIYALPLTSVLDVI 817

Query: 670 HLDLRRTNVVDGQLTIIVREKSIPLFYLQNWLAPKKGKVQLRQGHGHVVIVQIGSQRVGL 729
            ++  +   ++GQ  II R   +P+ +L++ L              +VV+V+    +VG+
Sbjct: 818 SVEKEQIKNLEGQEAIIYRNHILPVIWLKDALNTSGFS---DSDDLYVVVVEKNKGKVGM 874

Query: 730 VVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIALILDVPDL 775
           ++D +IG++E+V+KPL  +L+   G++GATI  DG +ALILD+ ++
Sbjct: 875 ILDEVIGRDEIVVKPLTGILKNINGLAGATILGDGRVALILDLNNI 920



 Score = 80.9 bits (198), Expect = 3e-19
 Identities = 47/152 (30%), Positives = 79/152 (51%), Gaps = 3/152 (1%)

Query: 13  FLVEAGEILELLSEQLVELENNPEDRD-LLNAIFRGFHTVKGGAGFLALSELVETCHGAE 71
           F+ EA E L+ L++ +VELEN PED + ++N IFR  HT+KG A  L    +    H  E
Sbjct: 11  FMTEAEEHLQSLNQNMVELENCPEDSERIINMIFRSAHTLKGSARTLGFEHISSLTHHME 70

Query: 72  NVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELLDELHRLSKPAS 131
           ++ D +R+G+  V+P ++D + K LD +      V + E     D + L E+ +  K   
Sbjct: 71  DILDYIRDGKIKVNPEIVDLLFKCLDALETMVSEVSDGEDTTSVDVDSLVEVIKSVKEKY 130

Query: 132 EDEDEAAEAHFD--EPEEELVEEIIEEVVEDV 161
              +   E   D  +P E   +++ E+ V ++
Sbjct: 131 LSGENPKEDPLDCSDPNEVAKKQVEEKTVNNI 162