Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 1089 a.a., chemotaxis protein CheA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  411 bits (1056), Expect = e-118
 Identities = 292/859 (33%), Positives = 423/859 (49%), Gaps = 125/859 (14%)

Query: 10   LQDFLVEAGEILELLSEQLVELENNPEDRD-LLNAIFRGFHTVKGGAGFLALSELVETCH 68
            L+DF+ EA E+ E L   L+ELE +P+++D  +N +FR FH +KG +G +   EL    H
Sbjct: 246  LKDFIDEAREMTEQLGTGLLELERHPDEKDDRVNDLFRFFHNLKGNSGIIGFRELNGLTH 305

Query: 69   GAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQER----------EPLQPADPE 118
             AE + + +R G+   S  L+D +L  +D ++     ++            E L+P    
Sbjct: 306  EAETLLNNIRRGEMQSSAELVDLLLFVVDVIDALVNRIETASGMVHGFDISEVLEPLQQA 365

Query: 119  LLDELHRL------------SKPASED---------------EDEAAEAHFDEPEEELVE 151
            +     RL            S+PA+E                ++ AA A  ++ +    +
Sbjct: 366  VAGGEARLPVGIVGMAKQAASQPAAESTATTEGSMQGGADSADESAAPAKGEQQKAAACD 425

Query: 152  EIIEEVVED--VVEEAVPNVETEVTASASSGVIDKGSIDDINEDEFEKLLDELHGKGKAP 209
                   ED  V +  V      +         D    + +  D   + L  +       
Sbjct: 426  PSATYDAEDLDVFKATVAQQMDNIRVGLDELARDASQKEYV--DALYRFLVTVQNSCAYM 483

Query: 210  GAQSPQAPASAPAKAAS-VTNSDLN---------------GDITDDEFEKLLDQLHGKGK 253
            GA+  +  A   A       N+DL+               GD+   E  ++ D L+G G 
Sbjct: 484  GAEDVRLYAERTAGLVDQARNADLDFGLMVDLLRQETSIIGDMLGKEIARMEDCLNG-GD 542

Query: 254  GPSIETAAPAAPV--TPSTPKATETPKPAAAKSAPGGDDLMTDEEFEKLLDELHGSGKGP 311
              S +  APAA    TPS+   T    P +   A G                       P
Sbjct: 543  AESEQGEAPAAATVGTPSSAATTSASAPESGSVAQGA----------------------P 580

Query: 312  SVEELEMATRPVASSPVSSDAKAS---AEASAPSTKPAAKPVAKPAA-------AKPAVA 361
            S E+      PV ++P    A +S   A ASAP+ + AA   AKPAA       AKP  A
Sbjct: 581  SSEKPAQKPEPVPAAPAFQSAASSGAQAAASAPAGQAAAAASAKPAAPATSGTEAKPVAA 640

Query: 362  KEEPAKA---------------PAPAAVKDSDESREVAAAGGAKKA---QTESTVRVDTS 403
               P KA               P PAA   +  S   AA  G   A   +  ST+RVD  
Sbjct: 641  ATTPPKAAAASSAAPAKAVATPPRPAAPAPAAASAPAAAPAGGPPAGGSKASSTIRVDHE 700

Query: 404  TLDTIMNMVGELVLVRNRLLSLGLNSND-----------EEMSKAVANLDVVTADLQGAV 452
             LD +MN++GEL++ RNR   L  +  +           + +S+    +  ++ DLQ  +
Sbjct: 701  KLDHLMNLIGELIINRNRYSMLARHLEEGGASVNVAEVAQNLSETTYAMARISDDLQDTI 760

Query: 453  MKTRMQPIKKVFGRFPRVVRDLARSLNKEIDLELRGEETDLDKNLVEALADPLIHLVRNS 512
            MK RM P+  VF RFPR+VRDL+R   KE+DL L GEET+LDK++VE + DPL+HL+RNS
Sbjct: 761  MKVRMVPVSSVFSRFPRLVRDLSRKSGKEVDLVLEGEETELDKSVVEVIGDPLVHLIRNS 820

Query: 513  VDHGIEMPDERAKNGKSRTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRGIAVKRGIMD 572
            VDHG+E  +ER   GK   G V L A  +G+ + + I DDG G+DP+K+R +AV++GI+ 
Sbjct: 821  VDHGVEPEEERIAKGKKPKGVVTLRAFHKGNSVAIEIEDDGKGIDPEKMREVAVRKGIVT 880

Query: 573  EDAANRLTNKECFNLIFMPGFSSKEKITDISGRGVGMDVVKTAINTLNGSIDIDSTMGKG 632
             + A  + ++E   LIF PGFSS EKITDISGRGVGMDVV+T I  L GS+ I S +GKG
Sbjct: 881  PEEAKAMDDREAMELIFAPGFSSAEKITDISGRGVGMDVVRTNIKNLKGSVSIHSEVGKG 940

Query: 633  TKITIKVPLTLAILPTLMVGVAGHPFALPLASVNEIFHLDLRRTNVVDGQLTIIVREKSI 692
            T+ T+ +PLTLAI+  LMV VAG  +A+PL +V+E   ++ RR   V G+  + +R + +
Sbjct: 941  TRFTLSLPLTLAIIDALMVNVAGQMYAIPLDAVSETTKIEARRLTDVKGRKAVTLRGEVL 1000

Query: 693  PLFYLQNWLAPKKGKVQLRQGHGHVVIVQIGSQRVGLVVDTLIGQEEVVIKPLDKLLQGT 752
             +  L   LA  +      Q    VV++    +R+GLVVD L+ ++E+VIKPL   L   
Sbjct: 1001 GIVDLSELLALPRSDA---QDVLSVVVIHDNDRRLGLVVDRLLERQEIVIKPLGAYLGDL 1057

Query: 753  PGMSGATITSDGHIALILD 771
             G+SGATI  DG + LILD
Sbjct: 1058 KGISGATIMGDGSVILILD 1076



 Score = 84.0 bits (206), Expect = 4e-20
 Identities = 41/97 (42%), Positives = 60/97 (61%)

Query: 5   LDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELV 64
           +D +I  DF+VEA E LE +   L+ELE  P++  LLN IFR  H++KG +GFL L+ + 
Sbjct: 6   MDPEIFADFIVEAKEHLETIEPNLLELEKAPDNLALLNEIFRPMHSLKGASGFLGLNRMN 65

Query: 65  ETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNE 101
           +  H AEN+ D LR G   V+  +MD +L   D + +
Sbjct: 66  QLAHRAENILDELRKGAMVVTSEIMDVILAVTDALRQ 102