Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 708 a.a., chemotaxis protein CheA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  288 bits (737), Expect = 7e-82
 Identities = 168/429 (39%), Positives = 256/429 (59%), Gaps = 18/429 (4%)

Query: 350 VAKPAAAKPAVAKEEPAKAPAPAAVKDSDESREVAAAGGAKKAQTESTVRVDTSTLDTIM 409
           +  P     A+A+++  +    +  +D D+  E A   GA       ++RV  + LD ++
Sbjct: 288 IVTPDQVASALAEQKTVRELRRSRTEDGDKPAEKAGDAGA-------SIRVSAAKLDYLV 340

Query: 410 NMVGELVLVRNRLLSLGLNSNDEEMSKAVANLDVVTADLQGAVMKTRMQPIKKVFGRFPR 469
           ++VGELV+V++++  +        M   V  L+ ++ DL+   +  RM PI   F RF R
Sbjct: 341 DLVGELVIVQSQIARMAHEHPAPGMLSLVEALERLSDDLRDTTLGVRMLPIGTTFSRFRR 400

Query: 470 VVRDLARSLNKEIDLELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKS 529
           +VRDLA  L K ++L   G ET+LDK ++E L DPL+H +RNS+DHG+E P+ R   GKS
Sbjct: 401 LVRDLAGELGKSVELVTLGGETELDKTVIERLGDPLVHCLRNSLDHGVESPERRLAAGKS 460

Query: 530 RTGKVILSASQEGDHIQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIF 589
            TG++ L+A+  G  + + I DDGAG+D +++   A+++GI+  +    L+ ++   LIF
Sbjct: 461 ATGRITLAAAHAGGEVLVTISDDGAGIDAERIYQAALRKGIIAPEV--DLSTRQKLELIF 518

Query: 590 MPGFSSKEKITDISGRGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTL 649
             GFS+ EK+T +SGRGVGMDVVK AI +L G I+++ST GKGT ITI++PLTLAI+  L
Sbjct: 519 AAGFSTAEKVTSVSGRGVGMDVVKRAIESLRGRIELESTPGKGTVITIRLPLTLAIIDGL 578

Query: 650 MVGVAGHPFALPLASVNEIFHLDLRRTNVVDGQLTII-VREKSIPLFYLQN-WLAPKKGK 707
            V V    + +PL  V E    +    + VDG+  II +R   +P   L++ +  P    
Sbjct: 579 QVRVGDESYIIPLPHVEEC--AEHNTPDHVDGRQRIINLRGDIVPFIRLRDVFRVP---- 632

Query: 708 VQLRQGHGHVVIVQIGSQRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIA 767
             +  G   +V+V     R GLVVD +IG+ + VIK L K+ +  PG+SGATI  DG +A
Sbjct: 633 -GVSPGMEQLVVVNALGSRFGLVVDCVIGEHQTVIKSLGKVYKDIPGISGATIQGDGSMA 691

Query: 768 LILDVPDLL 776
           LI+DVP L+
Sbjct: 692 LIIDVPGLV 700



 Score = 79.0 bits (193), Expect = 9e-19
 Identities = 38/94 (40%), Positives = 55/94 (58%)

Query: 6  DEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLALSELVE 65
          DE   Q F+ EA ++L  L   L+E+E  PEDR L++ IFR  HT+KG        ++  
Sbjct: 5  DELNRQAFVEEAQDLLAELETALLEIEERPEDRSLVDRIFRAMHTIKGSGAMFGFDDIAS 64

Query: 66 TCHGAENVFDILRNGQRHVSPSLMDTMLKALDTV 99
            H  E+VFD +RNG+  +SP L+D  LK+ D +
Sbjct: 65 FTHDVESVFDKVRNGEMELSPELLDLTLKSRDHI 98