Pairwise Alignments

Query, 785 a.a., chemotaxis protein CheA from Vibrio cholerae E7946 ATCC 55056

Subject, 762 a.a., CheA signal transduction histidine kinases (RefSeq) from Shewanella sp. ANA-3

 Score =  859 bits (2219), Expect = 0.0
 Identities = 475/789 (60%), Positives = 565/789 (71%), Gaps = 40/789 (5%)

Query: 1   MSYELDEDILQDFLVEAGEILELLSEQLVELENNPEDRDLLNAIFRGFHTVKGGAGFLAL 60
           M++++DE+ILQDFL+EAGEILELL EQLV LENNP+D +LLNAIFRGFHTVKGGAGFL+L
Sbjct: 1   MAFDVDEEILQDFLIEAGEILELLQEQLVALENNPDDTNLLNAIFRGFHTVKGGAGFLSL 60

Query: 61  SELVETCHGAENVFDILRNGQRHVSPSLMDTMLKALDTVNEQFRAVQEREPLQPADPELL 120
           + +V+ CH AEN FD+LR G+R VS  LMD +L+A+D +N  F   Q+ E   PADP LL
Sbjct: 61  TPMVDVCHEAENTFDLLRTGKRSVSAELMDIILQAVDAINTMFAQTQQGEQQDPADPALL 120

Query: 121 DELHRLSK----PASEDEDEAAEAHFDEPEEELVEEIIEEVVEDVVEEAVPNVETEVTAS 176
            +L  LS     P+   +  A      EPE E  E +IE V E    E +P  ++E++ S
Sbjct: 121 AKLKMLSSGEPLPSESGQSSAEVEPLPEPEPE-PEPVIETVFEVAAVEDMPIEKSELSDS 179

Query: 177 ASSGVIDKGSIDDINEDEFEKLLDELHGKGKAPGAQSPQAPAS-APAKAASVTNSDLNGD 235
                    SID+I+E EFE LLD LHG GK PG  +PQA A+ A       T++  + D
Sbjct: 180 ---------SIDEIDEAEFEALLDALHGAGKGPGVSAPQADAAPAVQNKPQATSASASDD 230

Query: 236 ITDDEFEKLLDQLHGKGKGPSIETAAPAAPVTPSTPKATETPKPAAAKSAPGGD-DLMTD 294
           ITDDEFE LLD+LHG GK           P  P        PKPAA    P  D D +T+
Sbjct: 231 ITDDEFEALLDELHGSGKFKG----KVEEPAKPKAEAVAAAPKPAA----PAVDSDEITE 282

Query: 295 EEFEKLLDELHGSGKGPSVEELEMATRPVASSPVSSDAKASAEASAPSTKPAAKPVAKPA 354
           +EFE+LLDELHG G  P+    +  + P  + P    AKA   A+APST  A K      
Sbjct: 283 DEFERLLDELHGKGGAPAKVTAKAESAPAKTEP----AKAPPSAAAPSTPAAPKASVATP 338

Query: 355 AAKPAVAKEEPAKAPAPAAVKDSDESREVAAAGGAKKAQTESTVRVDTSTLDTIMNMVGE 414
           A  PAV      KA    AV +   ++  AAA  A   Q E+TVRVDT+ LD IMNMVGE
Sbjct: 339 ATPPAV------KAKTDVAVAEKAPAK-AAAAASANVPQGETTVRVDTARLDQIMNMVGE 391

Query: 415 LVLVRNRLLSLGLNSNDEEMSKAVANLDVVTADLQGAVMKTRMQPIKKVFGRFPRVVRDL 474
           LVLVRNRLLSLG++ +DEEMSKA+ANLD+VTADLQGAVMKTRMQPIKKVFGRFPRVVRDL
Sbjct: 392 LVLVRNRLLSLGISRDDEEMSKALANLDLVTADLQGAVMKTRMQPIKKVFGRFPRVVRDL 451

Query: 475 ARSLNKEIDLELRGEETDLDKNLVEALADPLIHLVRNSVDHGIEMPDERAKNGKSRTGKV 534
           AR+LNKEIDL L GEETDLDKNLVEALADPL+HLVRNSVDHGIEMP++R  +GK RTG +
Sbjct: 452 ARTLNKEIDLVLVGEETDLDKNLVEALADPLVHLVRNSVDHGIEMPNDREASGKPRTGTI 511

Query: 535 ILSASQEGDHIQLAIVDDGAGMDPDKLRGIAVKRGIMDEDAANRLTNKECFNLIFMPGFS 594
            LSASQEGDHI L I DDGAGMDP+KL+ IA+KRG++DED A R+T+ E +NLIF PGFS
Sbjct: 512 TLSASQEGDHILLKIEDDGAGMDPEKLKQIAIKRGVLDEDTAARMTDSEAYNLIFAPGFS 571

Query: 595 SKEKITDISGRGVGMDVVKTAINTLNGSIDIDSTMGKGTKITIKVPLTLAILPTLMVGVA 654
           +K +I+DISGRGVGMDVVKT I  LNG++ IDS  GKGT + IKVPLTLAI+PTLMV VA
Sbjct: 572 TKVEISDISGRGVGMDVVKTRITQLNGTVHIDSMKGKGTVLEIKVPLTLAIMPTLMVDVA 631

Query: 655 GHPFALPLASVNEIFHLDLRRTNVVDGQLTIIVREKSIPLFYLQNWLAPKKGKVQLRQG- 713
              FALPL+SVNEIFHLDL +TN+VDGQLT+IVR K++PLFYL+ WL   + +   + G 
Sbjct: 632 KQVFALPLSSVNEIFHLDLTKTNIVDGQLTVIVRNKAVPLFYLEQWL--HRNRTNFKHGD 689

Query: 714 --HGHVVIVQIGSQRVGLVVDTLIGQEEVVIKPLDKLLQGTPGMSGATITSDGHIALILD 771
             HGHVVIVQ+G  ++G VVD LIGQEEVVIKPL  LL GTPGM+GATITSDG IALILD
Sbjct: 690 KKHGHVVIVQLGMMQIGFVVDALIGQEEVVIKPLGALLHGTPGMAGATITSDGGIALILD 749

Query: 772 VPDLLKQYA 780
           VP LLK YA
Sbjct: 750 VPGLLKHYA 758