Pairwise Alignments

Query, 338 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., CheW domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  117 bits (292), Expect = 5e-31
 Identities = 81/254 (31%), Positives = 127/254 (50%), Gaps = 22/254 (8%)

Query: 85  LEQILEENTAKIAKIDPVVQPCSVVEEIQEWEIETSYVEPDIETPESVIEDDLEPESVDT 144
           L + L EN      +D      +V+EE Q  + + + V   +E P       ++P+    
Sbjct: 57  LIEALPENVEAKGVLDEF--QAAVLEE-QARDAQKAVVAAAVEAPF------IKPQVAVM 107

Query: 145 EAEREIAIETSIEEPVAE---VPVVEAQAVPETQ---AGRNKLGTWTNTIREKDFQVLYF 198
           +A   I    S   P+ +    PVVE    P +       +    W      + F+ L F
Sbjct: 108 DAPAPILAPVSTVAPLLQGLVTPVVEIHLPPSSPPPPVPGDDRPAWA----AEPFECLLF 163

Query: 199 DVNGVTFAVPLDELGGIHRMT--TLNHLIGRPAWYLGLQTNRDSQLDVVDTAKWVMAEKL 256
           DV G+T AVPL  LG I+ +    L  L G+P W+LG+  ++   L V+DTA+WVM ++ 
Sbjct: 164 DVAGLTLAVPLVCLGSIYSLAGQELTPLFGQPEWFLGILPSQAGNLKVLDTARWVMPDRY 223

Query: 257 RDESYKQAYQYIVMLGESAWGLASTQLMGTELLSTEKVRWREQVGKRPWLAGMVKEKMCA 316
           RD+ ++Q  QY++ +    WGLA  Q+  +  L   +++WR   G+RPWLAG V E MCA
Sbjct: 224 RDD-FRQGLQYVISVQGYEWGLAVHQVSRSLRLDPNEIKWRSHRGQRPWLAGTVIEHMCA 282

Query: 317 LIHVQALIAMLNAG 330
           L+ V  L  ++ +G
Sbjct: 283 LLDVSELAELIASG 296