Pairwise Alignments

Query, 338 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., CheW domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  190 bits (482), Expect = 5e-53
 Identities = 121/352 (34%), Positives = 187/352 (53%), Gaps = 30/352 (8%)

Query: 7   SSEQALNDYFTALLDEETAEFEST------LKPEPVWEMAPAIQSVPNKSYFDAEIEELE 60
           S ++ + D+F  LL E+    + T       +  PV +++  + +    ++ DA     E
Sbjct: 4   SVDETVVDFFRLLLTEDAQVSDDTSLTKVHTQNAPVGDISVVVSTGVGNAFTDANAPTQE 63

Query: 61  LPNLEDVQRLLSQLESSNPVADLDLEQILEENTAKIAKIDPVVQPCS------------- 107
                    + S    S PV   +L QI +  +A+  +I P   P               
Sbjct: 64  TLTGSAAGEMASAPSKSQPVKT-EL-QIAKSESAQSPRIAPSRDPLDKASLEKLLAPVFD 121

Query: 108 VVEEIQEWEIETSYVEP---DIETPESVIEDDLEPE-SVDTEAEREIAIETSIEEPVAEV 163
           V + ++   +E   VE     +E+P  V E   +P+ +V T+ +  +  + ++E      
Sbjct: 122 VAKPLEHPAVEQPVVEQKAASVESPPVVAETVTKPKIAVRTKVQENVKAQVTLETEQDVT 181

Query: 164 PVVEAQAVPETQAGRNKLGTWTNTIREK---DFQVLYFDVNGVTFAVPLDELGGIHRMTT 220
           PV   Q  P+TQ G       T  +RE+   +FQVL+F V G+T AVPL  LGGI ++  
Sbjct: 182 PVAPVQTAPQTQTGATPPSI-TKDLREELDDEFQVLFFKVAGLTLAVPLVSLGGIVKVER 240

Query: 221 LNHLIGRPAWYLGLQTNRDSQLDVVDTAKWVMAEKLRDESYKQA-YQYIVMLGESAWGLA 279
           +NH+ GRP W+LG+QT+R+SQL++VDT  WVM EK  +E  +   YQY+V+L +S WGLA
Sbjct: 241 INHIFGRPDWFLGVQTHRESQLNLVDTCAWVMPEKYNEELAQNVNYQYLVLLEDSNWGLA 300

Query: 280 STQLMGTELLSTEKVRWREQVGKRPWLAGMVKEKMCALIHVQALIAMLNAGL 331
              L+ +  +   +V WR   GKRPWLAG+VKE+MC +++V+ALI MLNAGL
Sbjct: 301 CESLVNSVRIKQSQVNWRTTAGKRPWLAGVVKEQMCGILNVRALIQMLNAGL 352