Pairwise Alignments

Query, 338 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., CheW protein (RefSeq) from Shewanella sp. ANA-3

 Score =  175 bits (444), Expect = 1e-48
 Identities = 113/319 (35%), Positives = 171/319 (53%), Gaps = 44/319 (13%)

Query: 19  LLDEETAEFESTLKPEPVWEMAPAIQ-----SVPNKSYFDAEIEELELPNLEDVQRLLSQ 73
           LLD+      S  K      +A  +Q     SV N  + D   E   L N + +++LL+ 
Sbjct: 48  LLDDAILAEHSQAKVHASVTIAAEVQPQKAKSVSNMPHLD---EPAPLVNKQALEKLLAP 104

Query: 74  LESSNPVADLDLEQILEENTAKIAKIDPVVQPCSVVEEIQEWEIETSYVEPDIETPESVI 133
           +  +  + D   E +L E   ++ K+   +Q    +  + E +   +     IE P +V+
Sbjct: 105 VLKTVVIEDKPAE-VLSEVAPEMDKVPEEIQES--ISSLPECDASVT-----IEQPSTVV 156

Query: 134 EDDLEPESVDTEAEREIAIETSIEEPVAEVPVVEAQAVPETQAGRNKLGTWTNTIREKDF 193
           +D             EI IET+ E  V   P    + + E              + + +F
Sbjct: 157 DD-------------EIIIETTPETQVGFAPPSITKDLQE--------------VLDDEF 189

Query: 194 QVLYFDVNGVTFAVPLDELGGIHRMTTLNHLIGRPAWYLGLQTNRDSQLDVVDTAKWVMA 253
           QVL+F V G+T AVPL  LGGI ++  +NH+IGRP+W+LG+QT+R+ QL++VDT  WVM 
Sbjct: 190 QVLFFKVAGLTLAVPLVSLGGIVKVERINHIIGRPSWFLGVQTHREEQLNLVDTCAWVMP 249

Query: 254 EKLRDESYKQA-YQYIVMLGESAWGLASTQLMGTELLSTEKVRWREQVGKRPWLAGMVKE 312
           EK  D+  +   YQY+V+L  S WGLA   L+    ++  +V WR + GKRPWLAG+VKE
Sbjct: 250 EKYTDKLAQSVNYQYLVLLEGSNWGLACESLVNAVKINKSQVNWRSKAGKRPWLAGVVKE 309

Query: 313 KMCALIHVQALIAMLNAGL 331
           +MC ++HVQAL+ ML+AGL
Sbjct: 310 QMCGILHVQALVEMLDAGL 328