Pairwise Alignments

Query, 164 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 185 a.a., CheW protein (RefSeq) from Shewanella loihica PV-4

 Score =  110 bits (276), Expect = 1e-29
 Identities = 56/168 (33%), Positives = 100/168 (59%), Gaps = 4/168 (2%)

Query: 1   MSQANEVKVRKEKSNDEVLQWVTFQLEEETYGINVMQVREVLRYTEIAPVPGAPDYVLGI 60
           M+QA+E  +     +D   Q++TF + +E YG++++ V+E+  +     +P +P +V G+
Sbjct: 1   MTQADEAGITLTAKDDASDQYLTFIMADEEYGVDILSVQEIRGWEPTTVIPNSPSHVKGV 60

Query: 61  INLRGNVVTVIDTRSRFGLMQGEITDNTRIIVIE----SERQVIGILVDSVAEVVYLRSS 116
           INLRG +V +ID R RFG+   +    T +IVI+     E +VIGI+VD+V++V  +   
Sbjct: 61  INLRGTIVPIIDLRQRFGIASLDYGPTTVVIVIKVCVGDEHKVIGIVVDAVSDVFSVHHR 120

Query: 117 EIDSTPSVGTDESSKFIQGVSNRDGKLLILVDLNKFLTDEEWDEMAHM 164
           ++   P  G +    FI+G++N   K++IL+D++  L+ E   E A +
Sbjct: 121 DLRDAPDFGEETDLTFIKGLANLADKMVILLDIDTLLSSEVLPEAAQL 168