Pairwise Alignments

Query, 164 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 178 a.a., purine-binding chemotaxis protein CheW (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 94.4 bits (233), Expect = 9e-25
 Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 4/152 (2%)

Query: 7   VKVRKEKSNDEVLQWVTFQLEEETYGINVMQVREVLRYTEIAPVPGAPDYVLGIINLRGN 66
           V V    S  ++ Q++TFQ   +T+ I ++ V+E++    I  VP  P+++ GIINLRG 
Sbjct: 5   VNVGMTNSVGDITQYLTFQSANDTFAIGILDVKEIIEIEGITRVPMMPEFLCGIINLRGK 64

Query: 67  VVTVIDTRSRFGLMQGEITDNTRIIVI----ESERQVIGILVDSVAEVVYLRSSEIDSTP 122
           VV VID   R G +   I+  + I+++    E ERQ IG+LVD V E++ +        P
Sbjct: 65  VVPVIDLSKRLGRLTTVISKKSCIVLVEVSHEDERQTIGMLVDEVNEILEIDDEHTQPPP 124

Query: 123 SVGTDESSKFIQGVSNRDGKLLILVDLNKFLT 154
             G D    FI+ +       +IL+D+N  L+
Sbjct: 125 DFGADLRVDFIRAMGRVGEHFMILLDINYVLS 156