Pairwise Alignments

Query, 164 a.a., chemotaxis protein CheW from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., chemotaxis protein CheV (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 63.5 bits (153), Expect = 3e-15
 Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 7/142 (4%)

Query: 19  LQWVTFQLEE-ETYGINVMQVREVLRYTEIAPVPGAPDYVLGIINLRGNVVTVIDTRSRF 77
           L+ + F++   + + INV +V+EV++   +  +PG+  ++ G+ N+RG  + VID RS  
Sbjct: 20  LELLLFRINSMQLFAINVFKVKEVVKLPPLNAMPGSHPHISGVANIRGMSIPVIDLRSAI 79

Query: 78  GLMQGEITDNTRIIVIESERQVIGILVDSVAEVVYLRSSEIDSTPSVGTDESSKFIQGVS 137
           G       D   +I+ E  R V G LV  V  ++ +  S+I   P   T   + ++  ++
Sbjct: 80  GFKPVPPDDTANMIITEYNRSVQGFLVGKVEHIINMTWSDIMPPPK--TAGRNNYLTAIT 137

Query: 138 NRD----GKLLILVDLNKFLTD 155
             D     +L+ ++D+ K L +
Sbjct: 138 RIDYQGQSQLVSIIDVEKVLAE 159