Pairwise Alignments

Query, 651 a.a., c-type cytochrome biogenesis protein CcmF from Vibrio cholerae E7946 ATCC 55056

Subject, 659 a.a., cytochrome c-type biogenesis protein CcmF (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  683 bits (1762), Expect = 0.0
 Identities = 333/642 (51%), Positives = 449/642 (69%), Gaps = 3/642 (0%)

Query: 1   MIAEIGHFALIVSLSLAILLSVLPLVGASRNNTLLMNTARPLAWGMFFLLSISFAVLLWA 60
           MI E+GHF+LI+ ++ A LL+ +PL+G +R +  L+  A PLA+GMFF +++S   L ++
Sbjct: 1   MIPELGHFSLIIGVAFAFLLTSVPLIGVARKDQYLVRYAWPLAYGMFFFIALSVVSLGYS 60

Query: 61  FYINDFTVQYVASNSNSELPWYYRLTAVWGAHEGSLLLWVLIQAAWTVAVASFSRGMPQE 120
           F ++DF+V YVA +SNS+LP ++++ AVWG HEGSLL WV   + W  +VA FS+G+ + 
Sbjct: 61  FAVDDFSVAYVAHHSNSQLPIFFKIAAVWGGHEGSLLFWVFALSTWAASVALFSKGLEEV 120

Query: 121 SVARVLAVMGMITVGFLLFIILTSNPFLRTLPYFPIDGRDLNPLLQDPGLIIHPPMLYMG 180
             ARVLAV+ +I +GF LF++LTS+PF R  P  P +GRDLNP+LQD GLI HPPMLY+G
Sbjct: 121 FTARVLAVLALIVIGFSLFMLLTSSPFERIFP-MPAEGRDLNPMLQDVGLIFHPPMLYLG 179

Query: 181 YVGFSVAFSFAIASLMTGRLDTAWARWSRPWTTAAWLFLTLGIVLGSWWAYYELGWGGWW 240
           YVGFSV+F+FAIA+LM+G LD+AWARWSRPWT AAW+FLT GI LGSWWAYYELGWGGWW
Sbjct: 180 YVGFSVSFAFAIAALMSGHLDSAWARWSRPWTLAAWVFLTGGIALGSWWAYYELGWGGWW 239

Query: 241 FWDPVENASFMPWLAGTALMHSLAVTEKRGTFKAWTVLLAISAFSLSLLGTFLVRSGILV 300
           FWDPVENASFMPWL GTAL+HSL VTEKRG F+ WTVLL+I AFSLSLLGTF+VRSG+L 
Sbjct: 240 FWDPVENASFMPWLVGTALVHSLIVTEKRGAFRNWTVLLSIFAFSLSLLGTFIVRSGVLT 299

Query: 301 SVHAFASDPARGMFILGFLIAVIGGSLLLFAIKGASVRVRGNFELVSRENSLLVNNVLLM 360
           SVH+FA+DP+RGMFIL  L   IGGSL LFA + + +     FEL S+E  LLV NVLL 
Sbjct: 300 SVHSFAADPSRGMFILLLLGLAIGGSLTLFAFRASEMSSPARFELKSKETMLLVCNVLLT 359

Query: 361 TALAVVLIGTLLPLVHKQLGLGSVSIGAPFFNMLFAWLMIPFAFFMGIGPLIRWKRDQIS 420
            A   VL+GTL PL+   LG+G +S+G P+FN +F  +++    FMG+GP+IRWK+ +  
Sbjct: 360 VAAGTVLLGTLYPLLIDALGMGKISVGPPYFNAVFVPIVLVLFAFMGVGPIIRWKKSKAG 419

Query: 421 TLFKPMLITAMASLVLAALMMWLNAPTFSPMAYLGWVMAWWILLLHAYELHTRATHRHRF 480
            L + +L+ A+ SLV+  +  ++    F+     G   A WI+L  A   ++    +   
Sbjct: 420 ELKRQLLVPALVSLVIGIVTPFIVDGAFNAWVACGIAAAAWIILATAKAAYSIVKPKDG- 478

Query: 481 IVGVKKLQRSHWAMMLGHVGLAVSIIGIAMVQNYSIERDVRLAPGDNFQLNEYNFYFQGV 540
            V + ++ RS   M++ H+G+AVS+IG  MV NYS+E+ VR+ PG + +L  Y F +   
Sbjct: 479 EVSIARMGRSQLGMIIAHLGIAVSVIGATMVSNYSVEKSVRMGPGVSQELAGYTFKYLET 538

Query: 541 RDKDGPNYDGYIADFEITSQGQYVNTLHAEKRFYRTAKSMMTEAAIDRGITRDLYIAMGE 600
           ++  GPNY       EI    + +  L  ++R Y      MTEA ID G+ RDLY+ MG+
Sbjct: 539 KNVVGPNYTAQQGQIEIYKGDKLLTLLKPDRRQYNVRTMDMTEAGIDWGLFRDLYVTMGD 598

Query: 601 RLDDNRSWAVRIYYKPYVRWIWAGGLLMAIGGALAISDKRYR 642
            +  +  +AVR+ YKP+VRW+W G + M +GG  A SDKRYR
Sbjct: 599 PI-SSTEFAVRLNYKPFVRWLWFGAIFMMVGGFFAASDKRYR 639