Pairwise Alignments

Query, 651 a.a., c-type cytochrome biogenesis protein CcmF from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., cytochrome c biogenesis protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 53.9 bits (128), Expect = 8e-12
 Identities = 54/204 (26%), Positives = 84/204 (41%), Gaps = 15/204 (7%)

Query: 94  GSLLLWVLIQAAWTVAVASFSRGMPQESV--ARVLAVMGMITV------GFLLFIILTSN 145
           G ++L V I   W        R M +  +  +  + + G++T         L F  L S 
Sbjct: 42  GIIILGVFIAGLWIFLQRPPLRTMGETRLWYSFFMGIAGLLTYIRWKYRWILSFSTLLST 101

Query: 146 PFLRTLPYFP-IDGRDLNPLLQDPGLIIHPPMLYMGYVGFSVAFSFAIASLMTGRLDTAW 204
            F+      P I  + L P LQ    I H  +    Y     AF  A+  L   R    +
Sbjct: 102 VFVIINLMKPEIHDQSLMPALQSVWFIPHVTVYMFSYSVLGCAFIIALTGLF--RHKEEY 159

Query: 205 ARWSRPWTTAAWLFLTLGIVLGSWWAYYELGWGGWWFWDPVENASFMPWLAGTALMHSLA 264
              +     A   FL++G++LGS WA  +  WG +W WDP E  + + W+     +H L 
Sbjct: 160 LHTADNLVYAGVAFLSIGMLLGSLWA--KEAWGNYWSWDPKETWAAITWMGYLLYIH-LR 216

Query: 265 VTEKRGTFKAWTVLLAISAFSLSL 288
           +  + G  K   VLL +S  +L +
Sbjct: 217 LFRRTGR-KTLYVLLIVSFLALQM 239