Pairwise Alignments

Query, 651 a.a., c-type cytochrome biogenesis protein CcmF from Vibrio cholerae E7946 ATCC 55056

Subject, 679 a.a., cytochrome c-type biogenesis protein CcmF (RefSeq) from Shewanella sp. ANA-3

 Score =  501 bits (1289), Expect = e-146
 Identities = 275/653 (42%), Positives = 390/653 (59%), Gaps = 23/653 (3%)

Query: 1   MIAEIGHFALIVSLSLAILLSVLPLVGASRNNTLLMNTARPLAWGMFFLLSISFAVLLWA 60
           M  EIGH  LI+S  LA+L +++      ++   L+     L   MF  L  +   L+++
Sbjct: 4   MTPEIGHILLIISTVLALLSAIIHFFSIHQSQLYLIEFGNKLFNAMFISLLSALLCLIYS 63

Query: 61  FYINDFTVQYVASNSNSELPWYYRLTAVWGAHEGSLLLWVLIQAAWTVAV----ASFSRG 116
           F  +DF+V YVA++SNS+L   Y++ AVWG+HEGS+L WV   A W   +    A    G
Sbjct: 64  FISDDFSVAYVANHSNSQLALGYKIAAVWGSHEGSMLFWVFAIALWGAIINCRQAGKFAG 123

Query: 117 MPQESV-------ARVLAVMGMITVGFLLFIILTSNPFLRTLPYFPIDGRDLNPLLQDPG 169
           +    V       AR+LA++ ++ +GF LF++ TSNPF R LP  PI GRDLNP+LQD G
Sbjct: 124 LGNADVQTDKAYFARLLAILALVILGFNLFLLFTSNPFARLLPNIPIAGRDLNPILQDIG 183

Query: 170 LIIHPPMLYMGYVGFSVAFSFAIASLMTGRLDTAWARWSRPWTTAAWLFLTLGIVLGSWW 229
           LI+HPPML++GYVG +V F+ A+ASL+ G L      + RPW   AW+FLT G   GSWW
Sbjct: 184 LILHPPMLFLGYVGLTVCFAAALASLLGGALVHRHLEYLRPWVLLAWIFLTGGNAFGSWW 243

Query: 230 AYYELGWGGWWFWDPVENASFMPWLAGTALMHSLAVTEKRGTFKAWTVLLAISAFSLSLL 289
           AY ELGWGGWWFWDPVENASF+PWL  TAL+HSL +T K   F   T+ L I AFSLSLL
Sbjct: 244 AYNELGWGGWWFWDPVENASFIPWLVATALVHSLVLTRKTQGFALTTLFLCILAFSLSLL 303

Query: 290 GTFLVRSGILVSVHAFASDPARGMFILGFLIAVIGGSLLLFAIKGASVRVRGNFELVSRE 349
           G+FLVRSGI+ SVHAFA+DP RGM IL  L+  +G +LL+FAIK  +++   +  L+S+E
Sbjct: 304 GSFLVRSGIVQSVHAFAADPTRGMSILCLLVLFVGAALLIFAIKAPTLKREVSHNLLSKE 363

Query: 350 NSLLVNNVLLMTALAVVLIGTLLPLVHKQLGLGSVSIGAPFFNMLFAWLMIPFAFFMGIG 409
             LL+  ++L+ A   VL+GT  PL+++ LGLG++S+GAP+FN +F  L       MGI 
Sbjct: 364 TLLLLGAIVLVVAAFSVLLGTFYPLIYELLGLGTLSVGAPYFNAIFVPLTFIAVILMGIA 423

Query: 410 PLIRWKRDQISTLFKPMLITAMASLV---LAALMMWLNAPTFSPMAYLGWVMAWWILLLH 466
           PLI WK    ++  KP+ + A+ S+V   +AALM        +   +LG   A ++L   
Sbjct: 424 PLIAWK----ASTRKPLKVLALPSVVIVIIAALMSVRTQTDGALFLFLGCTSALFLLCCL 479

Query: 467 AYELHTRA-THRHRFIVGVKKLQRSHWAMMLGHVGLAVSIIGIAMVQNYSIERDVRLAPG 525
              +  ++        V     +R+  AM++GH G+AVSIIG   V  +  E  +R+ PG
Sbjct: 480 GMSVCMKSQAMTPPKPVKPSASKRAKLAMLVGHFGVAVSIIGATAVSFFEQEALLRMGPG 539

Query: 526 DNFQLNEYNFYFQGVRDKDGPNYDGYIADFEITSQGQ---YVNTLHAEKRFYRTAKSMMT 582
               L +Y   ++     + P++    A+  I    Q    +  LH +++ + +    ++
Sbjct: 540 QGKPLADYVLVYESTEPVETPSFTAIQANISIRDAKQDDLVLGYLHPQRQTFNSNGMEVS 599

Query: 583 EAAIDRGITRDLYIAMGERLDDNRSWAVRIYYKPYVRWIWAGGLLMAIGGALA 635
            A ID G  RDLY++MG +L D   + +RI YKP   WIW G LLM + GA+A
Sbjct: 600 HAGIDHGFWRDLYVSMGLQLSDT-EYLIRISYKPLATWIWLGALLMMLAGAIA 651