Pairwise Alignments

Query, 404 a.a., c-type cytochrome biogenesis protein CcmI from Vibrio cholerae E7946 ATCC 55056

Subject, 397 a.a., TPR repeat protein from Pseudomonas syringae pv. syringae B728a

 Score =  119 bits (299), Expect = 1e-31
 Identities = 105/394 (26%), Positives = 176/394 (44%), Gaps = 31/394 (7%)

Query: 4   FWISTLLLVAIAVVFVIIPFIQKRANNDQALRDELNKAFYKDRLKELEEETEEGI--VAD 61
           FW++  LL+ +A+ F++IP ++      +  R  LN A Y++RL EL+ + E+G+  VA 
Sbjct: 4   FWMAAGLLLLVALSFLLIPLLRGHRAQREEDRTALNVALYQERLNELQVQQEQGVLSVAQ 63

Query: 62  QQDLIADLKQTLLDDIPTQQKHQQENRVSLWMVALPSVLLVVGLSYALYAKFGHYQHVQA 121
            Q    +  + LL D    +   + +R+   ++ L + LLV  L  A Y + G    V  
Sbjct: 64  LQAARTEAARELLADTEGAEP-DRTSRLGKPLLVL-AALLVPMLGLAGYLQLGASDRV-- 119

Query: 122 WQQVSAQLPELSKKLMSPQAELSDEEMNDLTLALRTRLHYQPDDVTGWLLLGRIGLANRD 181
                    ELS++   P   L+D     +T  L   +  QPD       L R  +A   
Sbjct: 120 ---------ELSREFARPPTSLAD-----MTQRLERSVQAQPDSAENLYFLARSYMAQNR 165

Query: 182 LETAIGAMKKAFALDNEDPDVKFGYAQALMLSNDPVDQQEAKSILLKLAQRGYADLRVYS 241
              A    +++ AL    P++   +AQAL  ++D     + +++  +  Q    ++    
Sbjct: 166 PGDAAQMFERSVALAGRQPELLGQWAQALYFASDKHFTPQVQALTDEALQADPREVTSLG 225

Query: 242 LLAFDAFESGDFPAAIKYWSLMQQAIGPDDARYEMLSRSIESARKRMGEGMAE------G 295
           LL   AFE+  + AA+ YW+ +  A+  DDA    L   I  AR  + +  A+       
Sbjct: 226 LLGIAAFETQRYQAAVDYWTRLLAALPADDASRSALEGGIARARDNLAKRAADAAPAVKA 285

Query: 296 QSVKVTINLGE--QVKVDPN-AVLIVSIHAPGSPMPVAAARYPLGEFPRTVVLDDNNSMM 352
           +S+K+ + L    Q KV PN +V I +    G   P+A  R  + + P  V L D ++MM
Sbjct: 286 KSIKIHVELAAALQGKVRPNDSVFIFARAINGPAAPLAVKRITVADLPAEVELSDADAMM 345

Query: 353 EGSKLSSLESYVVRVRIDSDGNVATKSGDWYAES 386
               LS+     +  R+   G   T  G+W   S
Sbjct: 346 PQLNLSNFAQVQLVARVSRAGQPTT--GEWVGRS 377