Pairwise Alignments

Query, 404 a.a., c-type cytochrome biogenesis protein CcmI from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., TPR repeat-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 83.2 bits (204), Expect = 1e-20
 Identities = 93/424 (21%), Positives = 176/424 (41%), Gaps = 36/424 (8%)

Query: 1   MWMFWISTLLLVAIAVVFVIIPFI--QKRANNDQA-LRDELNKAFYKDRLKELEEETEEG 57
           M   WI   L V +++V +  P    QK    ++A +R   N   + +RL  LE+E E+ 
Sbjct: 1   MTTLWIFIALFVLVSLVLIWFPHFRQQKMLQAEEAGVRKATNLELFNNRLATLEKELEDE 60

Query: 58  IVADQQDLIA---DLKQTLLDDIPTQQKHQQENRVSLWMVALPSVLLVVGLSYALYAKFG 114
           ++ DQ +  A   +L+ +LL D+   +      ++    +  P+++ VV L  + Y    
Sbjct: 61  LL-DQDEFNALKKELEISLLQDMKQGEDESLVGQIKPKSLLWPTLMSVVVLGVSGY---- 115

Query: 115 HYQHVQAWQQVSAQLPELSKKLMSPQAELSDEE-MNDLTLALRTRLHYQPDDVTGWLLLG 173
            Y ++ A+  +   +P+      +P A +   + M      + ++L  +P++      LG
Sbjct: 116 FYANLGAYANLDKAVPD------NPHAGMDAAQIMTQRIQMMESQLQAEPENSQLLFSLG 169

Query: 174 RIGLANRDLETAIGAMKKAFALDNEDPDVKFGYAQALMLSNDPVDQQEAKSILLKLAQRG 233
              ++    + A+ A  KA  L     ++    A A+    +       ++I+ +     
Sbjct: 170 HAYISANRYDDAVKAFDKAMELVGTHAELLGPKATAMYYKANQRITPAVQAIIDQSLALD 229

Query: 234 YADLRVYSLLAFDAFESGDFPAAIKYWSLMQQAIGPDDARYEMLSRSIESARKRM----G 289
             D     L+  DAF S  +  AI  W ++  +   D  R  +++ +IESA+ RM    G
Sbjct: 230 PEDPSTLLLVGMDAFFSAQYKKAIDAWQIILDSDRSDVDRSAIIN-AIESAKMRMQAETG 288

Query: 290 EGMAEGQSVKVTINLGEQVKVD-------------PNAVLIVSIHAPGSPMPVAAARYPL 336
           E   +    +     G+ V +D              + + I + +  G  +P+AA +   
Sbjct: 289 EMPNDATHQQAKATTGKTVTIDVSIAPELLENVSGSDMLFIFARNTQGPKVPLAATKVSA 348

Query: 337 GEFPRTVVLDDNNSMMEGSKLSSLESYVVRVRIDSDGNVATKSGDWYAESPTMKTGEPVD 396
              P ++ LDD+  M    KLS  +   V   +   G+V  + GD      TM  G    
Sbjct: 349 KSLPVSITLDDSTGMGGDIKLSDAKQVEVIAVLSKHGSVKAQPGDLQGRLETMDVGSTAK 408

Query: 397 VVLD 400
           +V+D
Sbjct: 409 LVID 412