Pairwise Alignments

Query, 404 a.a., c-type cytochrome biogenesis protein CcmI from Vibrio cholerae E7946 ATCC 55056

Subject, 415 a.a., TPR repeat-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  100 bits (249), Expect = 8e-26
 Identities = 98/427 (22%), Positives = 184/427 (43%), Gaps = 35/427 (8%)

Query: 1   MWMFWISTLLLVAIAVVFVIIPFI--QKRANNDQA-LRDELNKAFYKDRLKELEEETEEG 57
           M  FWI   L+V +++  + IP    QK    ++A +R + N   + +RL  LE+E  E 
Sbjct: 1   MTTFWIFIALVVLVSLTLIWIPHFRQQKLLRTEEAGVRRQTNLELFNERLATLEKELNEE 60

Query: 58  IV--ADQQDLIADLKQTLLDDIPTQQKHQQENRVSLWMVALPSVLLVVGLSYALYAKFGH 115
           ++  A+   L  +L+ +LL DI         N++    +  PSV+ V  ++ + Y     
Sbjct: 61  LLDQAEFDALKKELEISLLQDIKQASDDSLVNQIKPKSILWPSVMSVCLIAISGYL---- 116

Query: 116 YQHVQAWQQVSAQLPELSKKLMSPQAELSDEE-MNDLTLALRTRLHYQPDDVTGWLLLGR 174
           YQH+ A++ +    P       +P A +   + M      +  ++  +P++   W  LG 
Sbjct: 117 YQHLGAFENIGNTQPA------NPHAGMDAAQIMAQRVQMMEAQVQAEPENSQAWFSLGH 170

Query: 175 IGLANRDLETAIGAMKKAFALDNEDPDVKFGYAQALMLSNDPVDQQEAKSILLKLAQRGY 234
             ++    + A+ A  K   L  +  ++    A A+          + ++++ +      
Sbjct: 171 AYISANQFDKAVAAFDKVMELVGKHAELIGPKATAMYYKAGQQMTPQIQALIDESLALDP 230

Query: 235 ADLRVYSLLAFDAFESGDFPAAIKYWSLMQQAIGPDDARYEMLSRSIESARKRMGEGMAE 294
            D     L+  DAF + ++  AI  W  +  +   D  R  +++ +IE+A  RM +G   
Sbjct: 231 QDPSTLLLVGMDAFFTANYQKAIDSWQTILNSDRTDVDRAALMN-AIETANLRM-QGETA 288

Query: 295 G--------------QSVKVTINLGEQV--KVDPNAVLIVSIHAPGSP-MPVAAARYPLG 337
           G              +SV + I++  ++  +  P+  + V   A   P +P+AA +    
Sbjct: 289 GMPNDDVHKQAKVATKSVSIAISISPELAAQAGPDDTIFVFARATEGPKVPLAATKVSAK 348

Query: 338 EFPRTVVLDDNNSMMEGSKLSSLESYVVRVRIDSDGNVATKSGDWYAESPTMKTGEPVDV 397
             P TV LDD+  M    KLS   S  V   +   GN+  ++GD   +   +  G+   +
Sbjct: 349 TLPVTVTLDDSTGMGGDVKLSQTASVEVIAVLSKHGNIKPQAGDIQGKVSKVNVGDTASL 408

Query: 398 VLDKQYE 404
           VLD Q +
Sbjct: 409 VLDTQVQ 415