Pairwise Alignments

Query, 254 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., VacJ-like lipoprotein precursor from Pseudomonas fluorescens FW300-N2E2

 Score =  114 bits (285), Expect = 2e-30
 Identities = 70/202 (34%), Positives = 114/202 (56%), Gaps = 7/202 (3%)

Query: 39  DPLESFNRQMWTINYDYLDPYVVRPVSLFYVGYVPKPVRSGIANFLSNLDEPASMVNNLL 98
           DP ES NR ++T N D +D Y ++P++  Y    P+ +  GI N   N+ +  ++ NN+L
Sbjct: 30  DPWESINRPIFTFN-DTIDTYALKPLAQGYQYVTPQFLEDGIHNMFRNIGDVGNLANNVL 88

Query: 99  MGNGTKAVDHFNRFWINTSFGLLGLIDIASEAGIKKYDDKAFSDAVGHYGVGNGPYLMVP 158
                 A     R   NT+FGLLG  D+ ++ G+++  D+ F   +G++G+ +GPY+M+P
Sbjct: 89  QAKPAAAGVDTARLIFNTTFGLLGFFDVGTQMGLQR-SDEDFGQTLGYWGLDSGPYVMLP 147

Query: 159 GYGPYTVREV-TDVVDGMYFPLAYL-NIWAGVGKWALEGMETRAALVSQEALLQDSPDPY 216
             GP T+R+    +VD    P  Y+ N+        L  ++TRA+L+S E ++  S D Y
Sbjct: 148 LLGPSTLRDAPAKLVDDYTAPYRYIDNVSVRNSIRGLNVVDTRASLLSAEKMV--SGDKY 205

Query: 217 SLARDAYLQRQAFKA-EIQVDD 237
              R+AYLQ + FK  + QV+D
Sbjct: 206 VFIRNAYLQNREFKVKDGQVED 227