Pairwise Alignments

Query, 254 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 232 a.a., Surface lipoprotein from Pseudomonas stutzeri RCH2

 Score =  110 bits (274), Expect = 3e-29
 Identities = 70/209 (33%), Positives = 113/209 (54%), Gaps = 16/209 (7%)

Query: 31  SSPHSQVNDPLESFNRQMWTINYDYLDPYVVRPVSLFYVGYVPKPVRSGIANFLSNLDEP 90
           ++P     DP E  NR ++  N D +D Y ++P++  Y    P+ V  GI N  SNL + 
Sbjct: 25  AAPALAEEDPWEGVNRAVFRFN-DTVDTYTLKPLAKGYQKVTPEFVEDGIGNVFSNLGDV 83

Query: 91  ASMVNNLLMGNGTKAVDHFNRFWINTSFGLLGLIDIASEAGIKKYDDKAFSDAVGHYGVG 150
             + N+LL G    A    +R   NT+FG+LG  D+A+  G+ K +D+ F   +G +G+G
Sbjct: 84  IVLTNDLLQGKVRDAGIDTSRILFNTTFGVLGFFDVATRMGLHK-NDEDFGQTLGAWGLG 142

Query: 151 NGPYLMVPGYGPYTVREVTD-VVDGMYFPLAYL------NIWAGVGKWALEGMETRAALV 203
           +GPY+++P  GP TVR+    V D    P  ++      N+  GV     + ++TRA L+
Sbjct: 143 SGPYVVLPLLGPSTVRDAFGRVPDSFLEPYPHMEHVPTRNVTRGV-----DLVDTRAGLL 197

Query: 204 SQEALLQDSPDPYSLARDAYLQRQAFKAE 232
           S E +++   D Y   R+AYLQ + F+ +
Sbjct: 198 SAEKMIRG--DRYIFVRNAYLQNREFRVK 224