Pairwise Alignments

Query, 254 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., VacJ-like lipoprotein from Phaeobacter inhibens DSM 17395

 Score =  103 bits (258), Expect = 3e-27
 Identities = 82/260 (31%), Positives = 126/260 (48%), Gaps = 14/260 (5%)

Query: 1   MHMELRMVGRLSWITLFTLFLVGCSSAPDDSSPHSQVNDPLESFNRQMWTINYDYLDPYV 60
           M   LR    ++ +T+ T  L GC++    S    +V DP E+ NR +   N   +D + 
Sbjct: 1   MTFPLRPFVLMALVTV-TSALAGCATQDSVSRNSGEVFDPYENTNRSIHNFNRG-VDRFA 58

Query: 61  VRPVSLFYVGYVPKPVRSGIANFLSNLDEPASMVNNLLMGNGTKAVDHFNRFWINTSFGL 120
            RP +  YV  VP  +     NF  NL  P   VN LL GN  ++    +RF +NT FG+
Sbjct: 59  FRPAAKGYVAIVPPDMVRSFNNFAENLSMPGQAVNALLQGNLKESGIAMSRFVVNTIFGI 118

Query: 121 LGLIDIASEAGIKKYDDKAFSDAVGHYGVGNGPYLMVPGYGPYTVREVTDV-VDGMYFPL 179
            GL D AS+  + + D   F + +  +GVG G Y+ +P +GP T R+ T + VD    P+
Sbjct: 119 GGLGDPASDFNMPRVDTN-FGETLHVWGVGEGAYVELPFFGPSTARDGTGILVDFFTNPI 177

Query: 180 AYL--NIWAGVGKWA--LEGMETRAALVSQ-EALLQDSPDPYSLARDAYLQRQAFKAEIQ 234
           +Y   N    +G +A  +  +  R       +++L +S D Y+ AR  YLQ + F+    
Sbjct: 178 SYARHNPADNIGVYAEVVRRLGDRGTYSDTIDSILYESADSYAQARLIYLQNRRFELGGD 237

Query: 235 VDDY-----DPEEEEYLDEY 249
             +Y     DP  + Y D Y
Sbjct: 238 QSEYEGVYGDPYSDPYEDIY 257