Pairwise Alignments

Query, 226 a.a., short-chain dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) from Shewanella amazonensis SB2B

 Score = 53.1 bits (126), Expect = 5e-12
 Identities = 58/247 (23%), Positives = 97/247 (39%), Gaps = 31/247 (12%)

Query: 4   MDIKSAIILITSASSALGSTLATHFVRLGAKVILCDRDQQGLVDTYWRCHALSD--QVAY 61
           M++K  +I+IT  +  LG  +A      GAK+ L D DQ+ L      C  + D  +V  
Sbjct: 1   MELKDKVIVITGGAGGLGLAMAKDLAAHGAKLALIDVDQERLERA---CADIGDATEVQG 57

Query: 62  FHIKDFSPESIETLLDMVEQKFERAPDVLINN--------LPSARLPSLVDEKPSEQFIQ 113
           + +     E +      + + F      L+NN        L  A+   + D    +QF  
Sbjct: 58  YALDITDEEDVVAGFRYILEDF-GVIHGLVNNAGILRDGLLIKAKDGVVTDRMSLDQFQS 116

Query: 114 QLAAIASSLFNFSHACSVRMRQRQTKGVIVNVVCYNTV--QDRSGIVSANSMVSGFTQSW 171
            +    +  F      +  M +    GVIVN+          ++   ++ + V+     W
Sbjct: 117 VINVNLTGTFLCGREAAAAMIESGQGGVIVNISSLARAGNMGQTNYAASKAGVATMAVGW 176

Query: 172 AQELTPFNIRVGGVVPQI------ASANDEIVHWSE---------MREELIRNTEYIVSN 216
           A+EL  FNIR   V P +      A+   E +   E           EE+     +I+ N
Sbjct: 177 AKELARFNIRAAAVAPGVIATEMTAAMKPEALERLEKMVPVGRLGQAEEIASTVRFIMEN 236

Query: 217 EYFSGRV 223
           +Y +GRV
Sbjct: 237 DYVNGRV 243