Pairwise Alignments

Query, 226 a.a., short-chain dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) from Shewanella loihica PV-4

 Score = 59.3 bits (142), Expect = 7e-14
 Identities = 57/247 (23%), Positives = 101/247 (40%), Gaps = 31/247 (12%)

Query: 4   MDIKSAIILITSASSALGSTLATHFVRLGAKVILCDRDQQGLVDTYWRCHALSD--QVAY 61
           MD+K  +++IT  +  LG  +A      GAK+ L D DQ+ L      C  + D  +V  
Sbjct: 1   MDLKDKVVVITGGAGGLGFAMAQELAAAGAKLALIDVDQEKLERA---CADIGDTTEVQG 57

Query: 62  FHIKDFSPESIETLLDMVEQKFERAPDVLINN--------LPSARLPSLVDEKPSEQFIQ 113
           +       E +      + + F +  +VL+NN        L  A+   + D     QF  
Sbjct: 58  YAFDITDEEDVVAGFGYILEDFGQV-NVLVNNAGILLDGMLVKAKEGEVTDRMSLAQFQA 116

Query: 114 QLAAIASSLFNFSHACSVRMRQRQTKGVIVNVVCYNTVQD--RSGIVSANSMVSGFTQSW 171
            +    +  F      +  M   + +GVIVN+       +  ++   ++ + V+  +  W
Sbjct: 117 VINVNLTGSFLCGREAAAAMITSKQQGVIVNISSLAKAGNIGQTNYAASKAGVAAMSVGW 176

Query: 172 AQELTPFNIRVGGVVPQI------ASANDEIVHWSE---------MREELIRNTEYIVSN 216
           A+EL  +NIR   V P +      A+   E +   E            E+    ++I+ N
Sbjct: 177 AKELARYNIRSAAVAPGVIETEMTAAMKPEALERLEKMVPVGRLGQASEIASTVKFIIEN 236

Query: 217 EYFSGRV 223
           +Y +GRV
Sbjct: 237 DYVNGRV 243