Pairwise Alignments

Query, 226 a.a., short-chain dehydrogenase from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., 3-hydroxy-2-methylbutyryl-CoA dehydrogenase IvdG (EC:1.1.1.178) (from data) from Shewanella oneidensis MR-1

 Score = 64.7 bits (156), Expect = 2e-15
 Identities = 61/247 (24%), Positives = 104/247 (42%), Gaps = 31/247 (12%)

Query: 4   MDIKSAIILITSASSALGSTLATHFVRLGAKVILCDRDQQGLVDTYWRCHAL--SDQVAY 61
           MD+K  +++IT  +  LG  +A +F + GAK+ L D DQ  L      C  L  S +V  
Sbjct: 1   MDLKDKVVVITGGAGGLGLAMAHNFAQAGAKLALIDVDQDKLERA---CADLGSSTEVQG 57

Query: 62  FHIKDFSPESIETLLDMVEQKFERAPDVLINN--------LPSARLPSLVDEKPSEQFIQ 113
           + +     E +      + + F +  +VL+NN        L  A+   + D    +QF  
Sbjct: 58  YALDITDEEDVVAGFAYILEDFGKI-NVLVNNAGILRDGMLVKAKDGKVTDRMSFDQFQS 116

Query: 114 QLAAIASSLFNFSHACSVRMRQRQTKGVIVNVVCYNTVQD--RSGIVSANSMVSGFTQSW 171
            +    +  F      +  M +    GVIVN+       +  +S   ++ + V+  +  W
Sbjct: 117 VINVNLTGTFLCGREAAAAMIESGQAGVIVNISSLAKAGNVGQSNYAASKAGVAAMSVGW 176

Query: 172 AQELTPFNIRVGGVVPQI------ASANDEIVHWSEM---------REELIRNTEYIVSN 216
           A+EL  +NIR   V P +      A+   E +   E           EE+     +I+ N
Sbjct: 177 AKELARYNIRSAAVAPGVIATEMTAAMKPEALERLEKLVPVGRLGHAEEIASTVRFIIEN 236

Query: 217 EYFSGRV 223
           +Y +GRV
Sbjct: 237 DYVNGRV 243