Pairwise Alignments

Query, 647 a.a., DNA topoisomerase III from Vibrio cholerae E7946 ATCC 55056

Subject, 743 a.a., DNA topoisomerase III from Azospirillum brasilense Sp245

 Score =  242 bits (617), Expect = 5e-68
 Identities = 191/641 (29%), Positives = 304/641 (47%), Gaps = 72/641 (11%)

Query: 1   MTRLFIAEKPSLARAIADALPKPHKKEQGCIRCANGDIVTWCIGHLLEQVEPDAYDERYK 60
           M  L I EK S A+ +  AL   + +            +    GHLL   EPD  +  +K
Sbjct: 1   MATLIITEKSSQAKDLRAALGDRYGR------------ILPAEGHLLRLAEPDEVNPDWK 48

Query: 61  KWNMADLPIIPEQWQLRPRKSSS-----QQLTVVRKLLKEATQIIHAGDPDREGQLLVDE 115
           +W+    P + +   L P K  S      +L  ++  LK   Q+I A D DREGQL+  E
Sbjct: 49  RWS----PTLLKPDGLYPTKPDSGGNKTAKLAAIKAALKGCDQVILATDCDREGQLIGQE 104

Query: 116 VIDYCKVPKSKKETVQRLLISDLNLSAVKRALQGLRSNREFIPLSVSALARSRADWLYGM 175
           ++++       +  VQR L +  +   ++ A   L+ N E  PL  +A+AR +AD ++ +
Sbjct: 105 ILEHLGF----RGRVQRALFTAQDPKTIRDAFAKLKPNNELRPLYEAAVARQQADQIFNL 160

Query: 176 NMSRAYTLLGKKAGYQGVLSVGRVQTPVLGLVVRRDEEIEHFIPHDYFTLDALIPYQNGT 235
           +++R  T      G +GV+ +GRV+TP L +V  R+ EI +F P DYF + A      G+
Sbjct: 161 SLTRTATKTLLAPGTRGVIGIGRVKTPTLSIVCLRELEIRNFKPEDYFEVVATATAAGGS 220

Query: 236 EYFDIRARWKPSEACLPWQDEEGRVTNRKLVDNVASRIANQPATVTESEQDQTKQAAPLP 295
             F +R    P +          R+ +R   + +A         ++ + +D+ +QA P  
Sbjct: 221 --FLMRHAPPPKD----------RIKDRARAEAIARAADGHGGPLSVTVEDR-RQAPPKL 267

Query: 296 YSLSALQIDAAKRYNFSAQQVLDLCQSLY--EKHKLITYPRSDCRYLPKEHLAQAPDVVA 353
           Y L ALQ    +R+ ++A + L++ Q LY  E  KLITYPR++ RYL +  +A  P +  
Sbjct: 268 YDLPALQKTCGQRWGWTADRTLEVAQELYDGEGKKLITYPRAEARYLSENQIADVPAIAG 327

Query: 354 AIANNAQEMVTAVNDADLSL------RSKAWNDSKVD--AHHAIIPTPK-----KASVNA 400
           A+       +      D+S       +S  + D  ++  +HHAI+P        ++ +N 
Sbjct: 328 ALTR-----LRGFAHLDISRPVIRRGKSGHFCDKALEGVSHHAIVPNVNVLDDLESRLNR 382

Query: 401 LSGHEMKVYQLIARQYLMQFYPAAIYAEAKLVFNIAGG----IFIAKGRQLLSAGWKVL- 455
           L+  E ++Y LI R YL    P   Y +  ++ N+       +F A GR  L  GWK   
Sbjct: 383 LTDDEKRLYALICRSYLAAVMPDYEYRQTTVLMNVPVEGKPVVFRAVGRIPLKLGWKAAF 442

Query: 456 -----TGQQDEQEECVDKVPPLPVGIVLQCREGEIKQRQTEPPRHFTEATLLQAMTGIAR 510
                 G+ DE+EE    +PPL  G   +  E  ++ ++T+ P  + E TL+ AM    R
Sbjct: 443 GSAETDGKPDEKEE-EQTLPPLTDGEPARLSEPRVEAKRTQAPPRYNEGTLVDAMQNAWR 501

Query: 511 FVADKELKKILRETDGLGTEATRAGILDTLFKRGLLQRDNKLIKSTPAGRGLIHALPSEA 570
           FV D  L+  L+E  G+GT ATRA I+  L ++ LL  D K +  TPAG  L   L   A
Sbjct: 502 FVEDLALRDRLKEAKGIGTPATRAEIIKGLRRQNLLGADGKWLVPTPAGLQLFETLRGAA 561

Query: 571 ---TYPDMTAHWEHQLQAIAEKGQAYQPFMQTLQGRLEQLI 608
                P  TA WE +L  +      ++  +  +    E+LI
Sbjct: 562 PTLVDPGTTALWEMRLDEVVVGRADFRSVIDGIADEAERLI 602