Pairwise Alignments

Query, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., acetylpolyamine aminohydolase from Synechococcus elongatus PCC 7942

 Score = 77.8 bits (190), Expect = 3e-19
 Identities = 79/301 (26%), Positives = 125/301 (41%), Gaps = 34/301 (11%)

Query: 2   IPLIYHPIYSQLDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPI----AAEL 57
           +P++Y   +   D  +GH  P    RL          +S+ W  + +++ P      + L
Sbjct: 11  LPIVYSDRFLDHDTGLGH--PERPERL---SATVTHLRSQPWSTALDWYLPTDLATRSPL 65

Query: 58  SRITRLHDPDYVQALLEGTLSAAKMRRIGFPWSKPLIERTLYSVGGTCLTVEQAL----Q 113
             I   H   Y+ ++               P S    E  L +V      +++ L    Q
Sbjct: 66  PWIETCHSLHYIDSVQHLAERGGGSLDPDTPCSAASYEVALLAVNAWLDGIDRLLTRQSQ 125

Query: 114 SGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATL 173
           +  A+    G HHA A  G GFCLF + AIAA +AL+   + KV I+D DVHHG+GT  L
Sbjct: 126 AAFALTRPPG-HHALATHGMGFCLFGNAAIAARYALA-QGLTKVAIVDWDVHHGNGTQAL 183

Query: 174 CAERDEIITLSFHCDKNFPARKPASSMDVGYAN--------QTGDEEFLSTFIQVVEMAV 225
             ++  I  +S H    +P    AS     Y N         +  +++   F  +V   +
Sbjct: 184 VEQQPAIAYVSLHQSPAYPGTGSASETGF-YENVRNLPLPPGSDGQDYRQCFETIVLPFL 242

Query: 226 NLHRPDLILYDAGVDIHNDDELGYLSISQA---AIAQRDRFMLGLAKQESIPIACVIGGG 282
              +P L++  AG D    D L  + +  A   A+ Q+ R +        IPI   + GG
Sbjct: 243 RAWQPQLLIVSAGYDAAAADPLANMRLQPADYGALTQQLRSL-------QIPILFGLEGG 295

Query: 283 Y 283
           Y
Sbjct: 296 Y 296