Pairwise Alignments

Query, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score = 79.0 bits (193), Expect = 1e-19
 Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 18/173 (10%)

Query: 94  IERTLYSVGGTCLTVE-----QALQSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFA 148
           +E  L  +GG    V+     +A  + VA    G  HHA  +   GFC FN++AIAA +A
Sbjct: 90  LEAALTGIGGAVAAVDAVFAGEADNAFVAARPPG--HHAEKNRAMGFCFFNNVAIAARYA 147

Query: 149 LSLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLSFHCDKNFPARKPASSMDVGYAN-- 206
            +    ++V I+D DVHHG+GT  +  +   ++  S H    +P     +  + G  N  
Sbjct: 148 QTAHGAERVAIVDWDVHHGNGTQDIFWDDPSVLFCSTHQIPLYPG--TGAKDETGVRNNV 205

Query: 207 -------QTGDEEFLSTFIQVVEMAVNLHRPDLILYDAGVDIHNDDELGYLSI 252
                   +G E F   F   V  A+   RPD +L  AG D H+ D L  +++
Sbjct: 206 VNAPISPNSGSEHFRDAFRSRVLPALENFRPDFLLISAGFDAHHRDPLAQINL 258