Pairwise Alignments

Query, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., histone deacetylase from Phaeobacter inhibens DSM 17395

 Score = 70.5 bits (171), Expect = 5e-17
 Identities = 64/245 (26%), Positives = 103/245 (42%), Gaps = 15/245 (6%)

Query: 52  PIAAELSRITRLHDPDYVQALLEGTLSAAKMRRIGFPWSKP-LIERTLYSVGGTCLTVEQ 110
           P+AAE   I R+H   Y+  L +        R  G  +  P  ++    + G     V+ 
Sbjct: 45  PMAAE-DDILRIHPASYLADLRKALPKEGFGRIDGDTFLSPGSLDAAFRAAGAAVRAVDM 103

Query: 111 AL----QSGVAIHLSGGYHHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHH 166
            L    Q+  A     G HHA  D   GFC F + A+AA  AL    + +V ++D DVHH
Sbjct: 104 VLGGEAQNAFAAVRPPG-HHAETDTAMGFCFFGNAALAAKHALDHHGLARVAVVDFDVHH 162

Query: 167 GDGTATLCAERDEIITLSFHCDKNFP-ARKPASS------MDVGYANQTGDEEFLSTFIQ 219
           G+GT  L  +    + +S      +P + +P         +++     +G  +  + ++ 
Sbjct: 163 GNGTQDLLWDEPRALFISSQQMPLWPGSGRPEEDGVHGQILNLPLPPGSGGVQMKAAYVD 222

Query: 220 VVEMAVNLHRPDLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQE-SIPIACV 278
                +   +P+LI+  AG D H DD L  L+ S        R +  LA +     I   
Sbjct: 223 QAFPRLRAFKPELIIVSAGFDAHQDDPLAELNWSTEDFRWLSRELCALAAELCGGRIVST 282

Query: 279 IGGGY 283
           + GGY
Sbjct: 283 LEGGY 287