Pairwise Alignments

Query, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., deacetylase, histone deacetylase/acetoin utilization protein from Dechlorosoma suillum PS

 Score =  190 bits (482), Expect = 4e-53
 Identities = 106/289 (36%), Positives = 152/289 (52%), Gaps = 6/289 (2%)

Query: 13  LDLPVGHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRITRLHDPDYVQAL 72
           L LP GHR+P+ KY  L     RQ    E +  + +F  P AA    + R HDP YV+ +
Sbjct: 11  LPLPPGHRFPMEKYARL-----RQTLLDEGYPPA-DFILPEAASREDLCRAHDPAYVERV 64

Query: 73  LEGTLSAAKMRRIGFPWSKPLIERTLYSVGGTCLTVEQALQSGVAIHLSGGYHHAHADFG 132
             G L+  +MR+IGFPWS  ++ER   S G T      AL  G  ++L+GG HHA    G
Sbjct: 65  CSGRLTPEEMRQIGFPWSDAMVERPRRSAGATLGACRAALAEGWGVNLAGGTHHAAHAAG 124

Query: 133 SGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLSFHCDKNFP 192
           +GFC+FND A+AA    +   V +V +ID DVH GDGTA +      + T S H  +N+P
Sbjct: 125 AGFCVFNDAAVAARALQAQGRVGQVAVIDCDVHQGDGTARILEGDASVFTFSIHGARNYP 184

Query: 193 ARKPASSMDVGYANQTGDEEFLSTFIQVVEMAVNLHRPDLILYDAGVDIHNDDELGYLSI 252
             K  S +D+   +   D  +L+   Q +    +  RP L +Y AG D +  D LG LS+
Sbjct: 185 FAKARSDLDIELPDGCDDAAYLAALEQGLADLFSRCRPQLAIYLAGADPYAGDRLGRLSL 244

Query: 253 SQAAIAQRDRFMLGLAKQESIPIACVIGGGYREDHTALVPLHLELLKAA 301
           + A +  RD  +L   ++  IP+A  + GGY  D    V +H   ++ A
Sbjct: 245 TMAGLEARDERVLAACRERGIPVAIAMAGGYARDIGDTVAIHANTIRCA 293