Pairwise Alignments

Query, 306 a.a., histone deacetylase from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., histone deacetylase superfamily from Marinobacter adhaerens HP15

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 25/178 (14%)

Query: 125 HHAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLS 184
           HHAHAD   G+C FN+ AI A  A       KV ++D D HHG+GT  +  +R++++T+S
Sbjct: 158 HHAHADLFGGYCFFNNAAIVAQ-AFRDQGYGKVAVLDVDFHHGNGTQAIFYDRNDVLTIS 216

Query: 185 FHCDKN--FP-----------ARKPASSMDVGYANQTGDEEFLSTFIQVVEMA---VNLH 228
            H D +  FP                 ++++ Y   T      S + Q +E A   +   
Sbjct: 217 LHGDPDLVFPHFLGFEDEIGEGAGEGYNLNIVYPPNTP----YSVWSQGLETACERIQSF 272

Query: 229 RPDLILYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPIACVIGGGYRED 286
           +PD ++   GVD   +D + +  ++        + +  L     +P    + GGY  D
Sbjct: 273 KPDALVVALGVDTFEEDPISFFKLNSGDYLTLGQRLAAL----GLPTVFTMEGGYDVD 326