Pairwise Alignments

Query, 600 a.a., DUF3413 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  325 bits (833), Expect = 3e-93
 Identities = 206/598 (34%), Positives = 312/598 (52%), Gaps = 27/598 (4%)

Query: 10  DRVSRLVGWGHWFAFFNIIAAMLIGTRYISQSPWPETLLGQLYLALSWVGHFGFLVFALY 69
           D+VSRLV WGHWFA FN   A+++G+RY+     PETL G  YLAL+ +G F FL F LY
Sbjct: 11  DKVSRLVNWGHWFALFNGFLALIVGSRYLETVGLPETLTGWGYLALASIGQFSFLAFLLY 70

Query: 70  LLVLFPLTFIIPSRSLFRFLAVCFSTLGLTVLLIDTQAYQIINLHLNPVVWELLFSDETS 129
           LL++FP+T ++P   + R LA   +TLGL +LL DT  Y    +HL+P  +++ ++D  S
Sbjct: 71  LLLIFPVTLLLPYSKILRGLAATVATLGLCILLYDTIVYDDYGVHLSPFAFDVAWADLPS 130

Query: 130 SVSADLQHLFVVLPL-IFLLELGLSEWVWRKQRKLSHKRIGRPLAAVFFFSFIASHLIYV 188
            +S      ++V P+ I  LEL  + ++W++  K+   RIG  +AAV    FIASHL+++
Sbjct: 131 LLSGT---SYIVTPIGILALELTAANFLWKRIVKIEKWRIGGKVAAVLGSCFIASHLVHI 187

Query: 189 WSDAYLYSPVTSQRANFPLSYPMTAKSFMEKHGLLDKEEYSKRLAEQNSDIDGLIYPLEP 248
           W+DA     +T     +PL YP TAKSFME HG LD      +L EQ      L Y L+ 
Sbjct: 188 WADAAKVKDITRYDDAYPLFYPATAKSFMESHG-LDSAGGLSKLGEQQQ----LGYSLDA 242

Query: 249 LEFSRRANNLNVLIVSINNLRADALTPELMPNTYQFANENLNFTNHYSSSND-MFGLFGL 307
           L   +  N  NVLIV+++ LRAD L P+ MP    +  +N  F  H S  N    G+F L
Sbjct: 243 LS-CKPQNKPNVLIVAVDALRADMLNPQTMPFLSNYGTDNQLFDKHLSGGNQFQSGMFSL 301

Query: 308 FYGLPSTYASSVRVQGNAPLLIDVMKKNDY---QFGLFSGNNFADPLYKETMFRSLPIEA 364
           FYGL  +Y ++   Q  +PLL      + Y   +FG  S      PL    +F       
Sbjct: 302 FYGLQGSYMAAPDFQTISPLLTQGFVTSGYALKRFGPASNEINPRPL---ALFNDFDAAL 358

Query: 365 IAVTNDESSPDEQAVQRWAEWLNVGQKQPWFSYLELTTVEEFSE----LSSAQESAEDRL 420
           +  +   +  D Q+ + + EW    Q  PWF+ + L   E +             A   +
Sbjct: 359 MDDSESRALADIQSREAFEEW-RKQQTSPWFALVNLGAPETYDTPVGFAGIETIKAPQGM 417

Query: 421 RSAYNLSVTQADQVINTVLEQLNSL--KLMDNTVVVITSNHGTEFNETKTNTWGSNTNYS 478
             A  +  +Q  Q ++ +  +L SL   L  +T+V+IT   G  F    +N   +  + S
Sbjct: 418 APAQRVLFSQYRQSLHFIDSELKSLINHLPADTLVIITGTSGKAFT---SNEAEARRDLS 474

Query: 479 RYQLQVPMVIHWPGKVAGTYAHRSSHLDFSVTLMQDLLGVSSNPVDYSSGKNLFNESKRK 538
              ++VP++IHWPG       + +SH   + TLM  +LG ++   DYS+G+ L   S++ 
Sbjct: 475 PQSVRVPLIIHWPGGEQAQVNYTTSHHGLAPTLMTRVLGCTNPITDYSAGRQLLMPSEQP 534

Query: 539 WILAGDARELALITDTQTTVLDKFGNFKVYDGDYQRLKETNPTLPVLMQGLTELQRFY 596
           W+  GD R  A+  D + TV+D+ G + +Y  D++       + P L+Q + E +R Y
Sbjct: 535 WVYVGDNRFFAIYQDDEITVIDRHGKYDIYSSDFKTRLNKKLSAPDLIQVMREGRRLY 592