Pairwise Alignments

Query, 481 a.a., Na+/H+ antiporter NhaC from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., Na+/H+ antiporter family protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 95.5 bits (236), Expect = 3e-24
 Identities = 103/449 (22%), Positives = 173/449 (38%), Gaps = 50/449 (11%)

Query: 25  AFSFTAKLDLPIQLALYIGWFVIMT----------------------LGIRLG-HKYKDL 61
           A SF A L L + LAL+IG  V  T                      L + L   K    
Sbjct: 13  AASFVALLPLFLFLALFIGAGVYFTSQGVDFAFYQLPSVVAILPAIVLALLLSKQKLNQA 72

Query: 62  ENAALNGI--SNGLGAVLILLAVGALVGTWISGGIVPTIIYYGLKAIHPSIFLLATMVIC 119
            +  + GI  SN +   LI L  GA      + G V   +  GL  I   + L    VI 
Sbjct: 73  IDTFIGGIGHSNIIAMCLIYLLAGAFASVAKATGGVDATVALGLSLIPSDLLLPGFFVIA 132

Query: 120 SLTALATGTSWGAAGTAGIAMMGIGQGLGIPAPITAGAVLSGCYFGDKMSPLSDSVILAS 179
           +  A A GTS G         +G+ Q   I  P+ AGA++SG  FGD +S +SD+ I A+
Sbjct: 133 AFIATAMGTSMGTIAAVAPIALGVSQEADISLPLMAGAIISGALFGDNLSIISDTTIAAT 192

Query: 180 SMSNVEVMEHIKGMLPIALISYVITGILFTLFGFHYAGNVDMSQVETVIAAMEQQFYITP 239
                 + +  +  L  AL + +IT + FTL G          Q E  +A     F    
Sbjct: 193 RTQGCNMKDKFRENLIFALPASLITLLAFTLAG----------QGEANVAPQSVDF---- 238

Query: 240 YSFVPVLIVLGLLAMRMPSFPVISFGSLLGIVWAVMIQDVDFLQAFNTAWAPYNIESGVS 299
              +P L +L L    +  F V+  G LL  +  +   D  ++      +A +     + 
Sbjct: 239 VKVLPYLCILFLAVAGLNVFVVLGIGILLAGLVGMFTTDYSWVSFSKDIYAGFGNMQEIF 298

Query: 300 FIDAILNRGGMSSMLGSVAVIVFGLGF-GGLLDRVGVLETIAKLFERRVTSPGSLATSTI 358
            +  ++  GG+++++     + F   F  GL+ R    +  A     R    G     ++
Sbjct: 299 ILSMLV--GGLAALMQQQGGLAFVSRFIEGLIARFSKAKGEASC---RAAELGMAGIVSL 353

Query: 359 GTAFMGNVFGSAMYVSLILTPKICAKNYDRLGYQRKNLSRNAEFGGTLTSGMVPWSDNGI 418
             A + N       VS++++  I      + G   K  +   +    +  G++P+    +
Sbjct: 354 TNACVAN-----NTVSIVISGDIARDLAQKHGVSAKRSASVLDIFSCIVQGLIPYGAQAL 408

Query: 419 YMASILGVATLSYAPFMWLSFVCILVTII 447
            + +   +  L    + W   +  LV ++
Sbjct: 409 LIGATFAITPLEAVSYAWYCMILALVAVL 437