Pairwise Alignments

Query, 481 a.a., Na+/H+ antiporter NhaC from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella amazonensis SB2B

 Score =  283 bits (723), Expect = 1e-80
 Identities = 155/466 (33%), Positives = 262/466 (56%), Gaps = 21/466 (4%)

Query: 6   QRLPSLTQVIVSL-GLFLLLA---FSFTAKLDLPI-QLALYIGWFVIMTLGIRLGHKYKD 60
           Q+ PSL   ++ +  L  +LA   + F++       Q+AL I   + M +GI+ GH +KD
Sbjct: 4   QKQPSLVDALIPVVALISMLAAAVYFFSSDSSYGANQIALIIAACLAMVVGIKNGHCWKD 63

Query: 61  LENAALNGISNGLGAVLILLAVGALVGTWISGGIVPTIIYYGLKAIHPSIFLLATMVICS 120
           +E   ++ I     A+LIL +VG+L+G WI  G VP +IYYG++ + P  F  A+ ++C+
Sbjct: 64  IEAGMVHSIGVATPALLILFSVGSLIGAWILSGTVPAMIYYGMQVLSPDYFYAASCLLCA 123

Query: 121 LTALATGTSWGAAGTAGIAMMGIGQGLGIPAPITAGAVLSGCYFGDKMSPLSDSVILASS 180
           L AL+ G+SW  AGT GIA++GI Q +G+   ITAGA++SG YFGDKMSP+SD+  LA +
Sbjct: 124 LVALSIGSSWTVAGTLGIALIGIAQAVGLSLEITAGAIISGAYFGDKMSPMSDTTNLAPA 183

Query: 181 MSNVEVMEHIKGMLPIALISYVITGILFTLFGFHYAGNVDMSQVETVIAAMEQQFYITPY 240
           ++  ++  HI+ M    + S ++  ++F + G         + ++  +  +  +F+I P+
Sbjct: 184 VAGTDIFSHIRHMTWTTIPSILLALLIFLVIGLSGDTAGADTNLDATLTLLSDEFHIGPH 243

Query: 241 SFVPVLIVLGLLAMRMPSFPVISFGSLLGIVWAVMIQDVDFLQAFNTA------------ 288
             +P+ +V+ L   +MP+FP +  G+L G+  A + Q    ++  N              
Sbjct: 244 LLLPLAVVIYLAYRKMPAFPTVILGTLAGVFCAAVFQFDGVVKLANDTSLSSALALIKGL 303

Query: 289 WAP----YNIESGVSFIDAILNRGGMSSMLGSVAVIVFGLGFGGLLDRVGVLETIAKLFE 344
           W      Y+  +G   +D +L+RGGMS M+ +V +I+  + FGG+++  G+L  + +   
Sbjct: 304 WIAMFNGYSASTGNEMLDGLLSRGGMSGMVNTVWLILAAMAFGGVMEATGLLNRLLQSML 363

Query: 345 RRVTSPGSLATSTIGTAFMGNVFGSAMYVSLILTPKICAKNYDRLGYQRKNLSRNAEFGG 404
           R V    SL  +T+G A   N+     ++++IL  ++    Y R      NLSR  E   
Sbjct: 364 RMVKGSSSLVITTLGCAIGANIITGDQFIAIILPGRMLKLEYTRHKLAPVNLSRALEDSA 423

Query: 405 TLTSGMVPWSDNGIYMASILGVATLSYAPFMWLSFVCILVTIITSY 450
           T+TS +VPW+  G +MAS LGVAT++Y PF + + +C +V+   +Y
Sbjct: 424 TVTSPLVPWNTCGAFMASTLGVATIAYLPFAFFNLICPVVSAGYAY 469