Pairwise Alignments

Query, 481 a.a., Na+/H+ antiporter NhaC from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella loihica PV-4

 Score = 97.1 bits (240), Expect = 1e-24
 Identities = 89/385 (23%), Positives = 158/385 (41%), Gaps = 35/385 (9%)

Query: 68  GISNGLGAVLILLAVGALVGTWISGGIVPTIIYYGLKAIHPSIFLLATMVICSLTALATG 127
           G SN +   LI L  GA      + G V   +  GL  +  ++ L    VI +  A A G
Sbjct: 79  GHSNIIAMCLIYLLAGAFASVAKATGGVDATVALGLSLVPSNLLLPGFFVIAAFIATAMG 138

Query: 128 TSWGAAGTAGIAMMGIGQGLGIPAPITAGAVLSGCYFGDKMSPLSDSVILASSMSNVEVM 187
           TS G         +G+ +   I   + AGAV+SG  FGD +S +SD+ I A+     E+ 
Sbjct: 139 TSMGTIAAVAPIALGVAEEAQIDLALMAGAVISGALFGDNLSIISDTTIAATRTQGCEMK 198

Query: 188 EHIKGMLPIALISYVITGILFTLFGFHYAGNVDMSQVETVIAAMEQQFY-ITPYSFVPVL 246
           +  +  L  A+ + +IT ++FTL G          Q +  +A  +  F  + PY  + VL
Sbjct: 199 DKFRENLIFAIPASLITLVVFTLAG----------QGQADVAPQQIDFLKVIPYLTILVL 248

Query: 247 IVLGLLAMRMPSFPVISFGSLLGIVWAVMIQDVDFLQAFNTAWAPYNIESGVSFIDAILN 306
            V GL       F V++ G LL  +      D   +Q     +A ++    +  +  ++ 
Sbjct: 249 AVAGLNV-----FVVLTVGILLAGITGFATLDYGLIQFGKDIYAGFSNMQEIFILSMLV- 302

Query: 307 RGGMSSMLGSVAVIVFGLGFGGLLDRVGVLETIAKLFERRVTSPGSLAT-----STIGTA 361
            GG+++++     + F            V + I KL  R  ++ G  +T        G  
Sbjct: 303 -GGLAALMQQQGGLAF------------VSKQIEKLIVRFSSAKGEASTRASELGMAGIV 349

Query: 362 FMGNVFGSAMYVSLILTPKICAKNYDRLGYQRKNLSRNAEFGGTLTSGMVPWSDNGIYMA 421
            + N   +   VS+++T  I     ++     K  +   +    +  G++P+    + +A
Sbjct: 350 ALTNTCVANNTVSIVVTGDIAKDLAEKHEVTPKRAASILDIFSCIIQGLIPYGAQALLIA 409

Query: 422 SILGVATLSYAPFMWLSFVCILVTI 446
           S   ++ L      W   +  +V I
Sbjct: 410 STFSISPLQAVAHAWYCMILAIVAI 434