Pairwise Alignments

Query, 481 a.a., Na+/H+ antiporter NhaC from Vibrio cholerae E7946 ATCC 55056

Subject, 525 a.a., Na+/H+ antiporter NhaC family protein from Methanococcus maripaludis S2

 Score = 70.9 bits (172), Expect = 1e-16
 Identities = 52/179 (29%), Positives = 92/179 (51%), Gaps = 18/179 (10%)

Query: 59  KDLENAALNGISNGLGAVLILL---AVGALVGTWISGGIVPTIIYYGLKA-IHPSIFLLA 114
           KD+ N    G    L A+ IL+   ++G+++G   +G  + ++I   L   I P+I  L 
Sbjct: 338 KDIANLFAKGSKLMLPAITILILAWSLGSVIGDLGTGTYLSSLIQNSLPVQILPAILFL- 396

Query: 115 TMVICSLTALATGTSWGAAGTAGIAMMGIGQGLGIPAPIT--AGAVLSGCYFGDKMSPLS 172
              +    A +TGTSWG  G      + +  GLG+P  +     AVL G  +GD  SP+S
Sbjct: 397 ---LSGFMAFSTGTSWGTFGIMLPIAVPMAVGLGMPEFVVPFVAAVLGGAIYGDHSSPIS 453

Query: 173 DSVILASSMSNVEVMEHIKGMLP-------IALISYVITGILFTLFGFHYAGNVDMSQV 224
           D+ I++S+ +  + ++H++  LP       +A + Y+I G    L G+  +G ++++ V
Sbjct: 454 DTTIMSSTGAGTKHIDHVQTQLPYTTLIGIMAFLGYLIVGYTINL-GYWVSGLINLAFV 511