Pairwise Alignments

Query, 481 a.a., Na+/H+ antiporter NhaC from Vibrio cholerae E7946 ATCC 55056

Subject, 525 a.a., Na+/H+ antiporter NhaC family protein from Methanococcus maripaludis JJ

 Score = 66.6 bits (161), Expect = 2e-15
 Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 18/178 (10%)

Query: 60  DLENAALNGISNGLGAVLILL---AVGALVGTWISGGIVPTIIYYGLKA-IHPSIFLLAT 115
           D+      G    L A+ IL+   ++G+++G   +G  + ++I   L   I P+I  L  
Sbjct: 339 DIAGLFAKGSKLMLPAITILILAWSLGSVIGDLGTGTYLSSLIQNSLPVQILPAILFL-- 396

Query: 116 MVICSLTALATGTSWGAAGTAGIAMMGIGQGLGIPAPIT--AGAVLSGCYFGDKMSPLSD 173
             +    A +TGTSWG  G      + +  GLG+P  +     AVL G  +GD  SP+SD
Sbjct: 397 --LSGFMAFSTGTSWGTFGIMLPIAVPMAVGLGMPEFVVPFVAAVLGGAIYGDHSSPISD 454

Query: 174 SVILASSMSNVEVMEHIKGMLP-------IALISYVITGILFTLFGFHYAGNVDMSQV 224
           + I++S+ +  + ++H++  LP       +A + Y+I G    L G+  +G ++++ V
Sbjct: 455 TTIMSSTGAGTKHIDHVQTQLPYTTLIGIMAFLGYLIVGYTINL-GYWVSGLINLAFV 511