Pairwise Alignments

Query, 212 a.a., MarC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., integral membrane protein (MarC family) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  119 bits (297), Expect = 6e-32
 Identities = 67/203 (33%), Positives = 114/203 (56%), Gaps = 8/203 (3%)

Query: 4   FEIAIFLQFFLGLVAAVNPVGIMPVFVSLTGHMTLEEKNKTAATANIAVAIILIIALLAG 63
           F +  F  FF       NP+G MPVF+++T  MT +E+      A I   I L++ + AG
Sbjct: 8   FALLCFTSFF----TLTNPLGTMPVFLTMTHGMTDKERQTIVRRATIVSFITLMVFVFAG 63

Query: 64  QMLLDLFSISLDSFRVAGGLLLLSIAFSMMSGKLGEDKQNKQEKSEYISREQIAVVPLAM 123
           Q L   F IS + FR+AGG+++  I F M+  +    K   +E   Y   + I++ PL +
Sbjct: 64  QFLFKFFGISTNGFRIAGGVIIFKIGFDMLQARYTPMKLKDEEIKTY--ADDISITPLGI 121

Query: 124 PLMAGPGAISSTIVYGSRYPNMLDTLGIILTVVAFSF-CSWLLFRSAPYIVRLLGQTGIN 182
           P++ GPGAI++ IV   +  +     GI++  +A  +  ++ + R++  +V++LG+TG N
Sbjct: 122 PMLCGPGAIANAIVL-MQDSHTYAMKGILIGTIALIYLLTFFILRASTRLVKVLGETGNN 180

Query: 183 VITRIMGLILGALGIEFIANGLR 205
           V+ R+MGLIL  + +E   +G +
Sbjct: 181 VMMRLMGLILMVIAVECFVSGAK 203