Pairwise Alignments

Query, 291 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  354 bits (909), Expect = e-102
 Identities = 183/308 (59%), Positives = 228/308 (74%), Gaps = 20/308 (6%)

Query: 3   WIFLTLFAAFMQAWRNAFQSRLSGDVTTAGVTLARFLWASPIAGVYLIALYQWQPA---- 58
           WI  T  AAFMQ+WRNA QS+LS DV  AGVTLARFLWA PIA  YL ALY + P     
Sbjct: 2   WIVFTFLAAFMQSWRNALQSQLSRDVKVAGVTLARFLWAGPIAACYLAALYLFLPPDLQQ 61

Query: 59  ----------------ALPTFSSAFWHYVVGASFMQILATALMVKLFKYNNYAVGAGLAK 102
                           +L  F + FW +V+GA+ MQI+AT LMVKLF+  ++A+GAGLAK
Sbjct: 62  AGQQVGQQAGQQVGQESLQLFPAPFWGFVLGAALMQIVATGLMVKLFQLRDFAIGAGLAK 121

Query: 103 SEALVAAILGMLFFGTQLTVLGWLGVVIGGVGVFMLSSHGGFKQLSLPTVLLGLSSGSAF 162
           SEA+VAA+ G LFFGTQL+ LGWLGVVIG V V ++S   G  +LS   +LLGL+ GSAF
Sbjct: 122 SEAIVAAVFGALFFGTQLSPLGWLGVVIGAVAVLLMSKGAGVARLSPQVLLLGLACGSAF 181

Query: 163 ALTSLWVREASLASQLPFPYSAAWVLLLVISLQTLCLVGYLLIKERSTLYKLWQRPKLVM 222
           ALTSLWVREASL   LPFP+SAAWVL  VIS+QT+ L+ +L +++R TL  LW+RPKL +
Sbjct: 182 ALTSLWVREASLVLTLPFPHSAAWVLFWVISVQTVILLLFLYLRDRQTLAALWRRPKLTL 241

Query: 223 LTSVSSCLGSIGWFSAMSLQAVPYVKTLGQVEIFFTMLISIFWLGQKVRIKDGFGLILVA 282
             SV+SCLGSIGWFSAM+LQAVPYVKTLGQVE+FFT++++  +L QKV+ K+   L+L+A
Sbjct: 242 AISVTSCLGSIGWFSAMALQAVPYVKTLGQVEVFFTLIVAGSYLKQKVKPKEMTALLLIA 301

Query: 283 LAAILVMW 290
           +AAILV+W
Sbjct: 302 VAAILVIW 309