Pairwise Alignments

Query, 291 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  404 bits (1039), Expect = e-117
 Identities = 200/288 (69%), Positives = 239/288 (82%)

Query: 3   WIFLTLFAAFMQAWRNAFQSRLSGDVTTAGVTLARFLWASPIAGVYLIALYQWQPAALPT 62
           WI  T+ AAFMQAWRNAFQS+LS +V  AGVTLARF+WA PIA +YL  LY W     P 
Sbjct: 2   WILFTILAAFMQAWRNAFQSQLSKEVKVAGVTLARFIWAGPIAALYLAILYLWDDVGWPQ 61

Query: 63  FSSAFWHYVVGASFMQILATALMVKLFKYNNYAVGAGLAKSEALVAAILGMLFFGTQLTV 122
           F+  F  ++VGAS MQILAT LMVKLF+  N+A+GAGLAKSEA+VAAILG LFFGT L+V
Sbjct: 62  FTGEFIGFIVGASMMQILATGLMVKLFQQQNFAIGAGLAKSEAIVAAILGTLFFGTHLSV 121

Query: 123 LGWLGVVIGGVGVFMLSSHGGFKQLSLPTVLLGLSSGSAFALTSLWVREASLASQLPFPY 182
           LGW+GV++GGV VF+LS+  G + LSL TV+LG++SGSAFALTSLWVREASL   + FP+
Sbjct: 122 LGWVGVILGGVAVFLLSAKQGLRHLSLSTVILGIASGSAFALTSLWVREASLRLDVGFPH 181

Query: 183 SAAWVLLLVISLQTLCLVGYLLIKERSTLYKLWQRPKLVMLTSVSSCLGSIGWFSAMSLQ 242
           SAAWVLLLVISLQT+ LV YL++K+++TL  L QRPKL +LTS +SC GSIGWFSAMSLQ
Sbjct: 182 SAAWVLLLVISLQTIVLVSYLVLKDKATLIDLLQRPKLTLLTSTASCFGSIGWFSAMSLQ 241

Query: 243 AVPYVKTLGQVEIFFTMLISIFWLGQKVRIKDGFGLILVALAAILVMW 290
           AVPYVKTLGQVEIFF MLIS FWL ++V+IK+ FGL+L+A+AAILVMW
Sbjct: 242 AVPYVKTLGQVEIFFMMLISAFWLKEQVKIKEMFGLVLIAVAAILVMW 289