Pairwise Alignments

Query, 291 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., hypothetical protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  146 bits (368), Expect = 6e-40
 Identities = 91/295 (30%), Positives = 154/295 (52%), Gaps = 6/295 (2%)

Query: 3   WIFLTLFAAFMQAWRNAFQSRLS-GDVTTAGVTLARFLWASPIAGVYLIALYQWQPAALP 61
           WI +T+FAAF Q  R   Q  L    ++T G T +RFL+++P+  V  +     +    P
Sbjct: 4   WIPVTIFAAFAQNLRFMLQRHLKVTGLSTGGATFSRFLFSAPLVAVIALGYGAVRGLEFP 63

Query: 62  TFSSAFWHYVVGASFMQILATALMVKLFKYNNYAVGAGLAKSEALVAAILGMLFFGTQLT 121
                FW         QI AT  +V LF + ++A+G    K+E ++ A++G +  G  ++
Sbjct: 64  ALGPRFWVAATLGGTAQIFATMCVVALFAHRSFAIGITFKKTEVMLTALIGFVVLGEAVS 123

Query: 122 VLGWLGVVIGGVGVFMLSSH----GGFKQLSLPTVLLGLSSGSAFALTSLWVREASLASQ 177
           +   L + IG VGV +LS      G +++L      LGL+SG+ F ++++  R ASL   
Sbjct: 124 LGAALAIAIGFVGVVILSDPPEAVGDWRRLFNRGAALGLASGALFGVSAIGYRAASLEIA 183

Query: 178 LPFPYSAAWVLLL-VISLQTLCLVGYLLIKERSTLYKLWQRPKLVMLTSVSSCLGSIGWF 236
               +  A V L+ V + QT  + GYL  +ER  + ++    ++  L  +SS  GS+ WF
Sbjct: 184 SDDVFQRASVTLMCVTAFQTALMAGYLAWRERGEITRVVASWRVSTLVGLSSLAGSLAWF 243

Query: 237 SAMSLQAVPYVKTLGQVEIFFTMLISIFWLGQKVRIKDGFGLILVALAAILVMWT 291
           +A +LQ   YVK LGQVE+ F+ L + F   +K   ++  G+  +  + ++++ T
Sbjct: 244 TAFTLQNAAYVKALGQVELVFSFLATTFVFREKTTGREVLGVAAIVASVLVLVLT 298