Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., RluA family pseudouridine synthase from Parabacteroides merdae CL09T00C40

 Score =  147 bits (370), Expect = 5e-40
 Identities = 106/321 (33%), Positives = 156/321 (48%), Gaps = 42/321 (13%)

Query: 21  RIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEAGDVVRV----PPVTVEV- 75
           R+D FL +++    ++ +      G +  N K VK+ Y+++  DVV +    PP T E+ 
Sbjct: 45  RVDKFLVDRMFGATRNRIQSAADAGCIMANGKPVKSNYRVKPEDVVTIMMTRPPRTFEIL 104

Query: 76  KENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFGAIEALRA---- 131
            EN P                IVYEDD LL+++KP+G  VH G G + G +    A    
Sbjct: 105 PENIPIK--------------IVYEDDDLLVVDKPAGLVVHPGHGNYTGTLVNALAWYLK 150

Query: 132 ----LRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVMGHWD 187
                 P    L LVHRID+DTSG+L+VAKK  A  HL  QF  KT ++ Y ALV G   
Sbjct: 151 DDPTYDPNDPALGLVHRIDKDTSGLLVVAKKPEAKAHLSMQFFHKTTKREYRALVWGIVR 210

Query: 188 AECKVVNAPLLKNEVN----SIVRVNPNGKPSETRFRILEKFAEATLVQASPVTGRTHQI 243
            +   +   + +N  +    ++      GK + T + +LE+    TLV+    TGRTHQI
Sbjct: 211 EDEGRIEGNIGRNPRDRMQMTVFPEGDQGKTAVTHYSVLERLGYVTLVKCRLETGRTHQI 270

Query: 244 RVHTQYMGHPIAWDDRYGDRRFDAYTAQ----------FGI-ERLFLHAANIQFVHPASE 292
           RVH +Y+GH +  D+RYG       T            F I  R  LHA  + FVHP + 
Sbjct: 271 RVHMKYIGHTLFNDERYGGNEILKGTTSSKYKQFVDNCFAICPRQALHAKTLGFVHPTTG 330

Query: 293 KKLEIHAPLEAHLEQALTKMR 313
           +++   + + A +   + K R
Sbjct: 331 EEMFFDSEIPADMTALIDKWR 351