Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 375 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

 Score =  140 bits (353), Expect = 5e-38
 Identities = 99/310 (31%), Positives = 157/310 (50%), Gaps = 31/310 (10%)

Query: 16  DMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKA-EYKLEAGDVVRVPPV--- 71
           D  G+R+D  L   L    ++ +   +R+G V +N + V+  ++KL  G+ + +  V   
Sbjct: 31  DAGGRRLDQVLAELLPQYSRNRLQTWIREGRVSLNGQPVQEPKHKLLGGEFLNLEEVQDE 90

Query: 72  --TVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLHFGAI-EA 128
               E  E+ P P              +VYED+ +LI+NKP+G  VH GSG   G +  A
Sbjct: 91  KLAAETPEDIPFP--------------VVYEDEAILIINKPAGLVVHPGSGNWSGTLLNA 136

Query: 129 LRALRPQARFLE---LVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVMGH 185
           L    PQ   +    +VHR+D+DTSG+++VAK   A   L  Q + +TV++ Y AL++G+
Sbjct: 137 LLHHTPQLAQVPRAGIVHRLDKDTSGLMVVAKTLEAQTDLVRQLQARTVKREYRALLVGY 196

Query: 186 WDAECKVVNAPLLKNEVN--SIVRVNPNGKPSETRFRILEKFAEATLVQASPVTGRTHQI 243
            +     V+AP+ ++      +  V  NG+ + T + +LE F   TLVQ    TGRTHQI
Sbjct: 197 LNRN-GTVDAPIGRHPTQRTKMAVVQHNGREARTHYTVLEHFERCTLVQCRLETGRTHQI 255

Query: 244 RVHTQYMGHPIAWDDRYGDRRFDAYTAQFGIERLFLHAANIQFVHPASEKKLEIHAPLEA 303
           RVH   +G P+  D  Y   +    TA     R  LHA  +  +HP + + ++  AP+  
Sbjct: 256 RVHMAALGFPLVGDAVYNKGK----TAGVRFPRQALHAYRLGLIHPLTREPMQWDAPVPD 311

Query: 304 HLEQALTKMR 313
            +   L  +R
Sbjct: 312 DMAALLKTLR 321