Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., Conserved hypothetical protein member of yabO/yceC/yfiI family from Mycobacterium tuberculosis H37Rv

 Score =  129 bits (323), Expect = 1e-34
 Identities = 92/310 (29%), Positives = 153/310 (49%), Gaps = 21/310 (6%)

Query: 13  IDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEAGDVVRVPPVT 72
           + + +AG R+D  L  +L  + ++    +  +G V +N        +L +G +++V    
Sbjct: 8   VPDGLAGMRVDTGLA-RLLGLSRTAAAALAEEGAVELNGVPAGKSDRLVSGALLQV---- 62

Query: 73  VEVKENEPAPPSTKLSKVAELEHC-IVYEDDHLLILNKPSGTAVHGGSGLH----FGAIE 127
                  P  P+   +   ++E   I+Y DD ++ ++KP+  A H   G       G + 
Sbjct: 63  -----RLPEAPAPLQNTPIDIEGMTILYSDDDIVAVDKPAAVAAHASVGWTGPTVLGGLA 117

Query: 128 ALRALRPQARFLE---LVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALVMG 184
           A       +   E   +VHR+D  TSG+++VA    A   L+  F+ +TV K Y+ALV G
Sbjct: 118 AAGYRITTSGVHERQGIVHRLDVGTSGVMVVAISERAYTVLKRAFKYRTVDKRYHALVQG 177

Query: 185 HWDAECKVVNAPLLKNEVNS-IVRVNPNGKPSETRFRILEKFAEATLVQASPVTGRTHQI 243
           H D     ++AP+ ++  +     +  NG+ S T +  LE F  A+L+     TGRTHQI
Sbjct: 178 HPDPSSGTIDAPIGRHRGHEWKFAITKNGRHSLTHYDTLEAFVAASLLDVHLETGRTHQI 237

Query: 244 RVHTQYMGHPIAWDDRYGDRRFDAYTAQFGIERLFLHAANIQFVHPASEKKLEIHAPLEA 303
           RVH   + HP   D  YG         + G++R +LHA ++ F HPA  +++EI +P  A
Sbjct: 238 RVHFAALHHPCCGDLVYG--ADPKLAKRLGLDRQWLHARSLAFAHPADGRRVEIVSPYPA 295

Query: 304 HLEQALTKMR 313
            L+ AL  +R
Sbjct: 296 DLQHALKILR 305