Pairwise Alignments

Query, 315 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase RluC from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., pseudouridine synthase, RluA family from Marinobacter adhaerens HP15

 Score =  309 bits (792), Expect = 6e-89
 Identities = 158/313 (50%), Positives = 220/313 (70%), Gaps = 6/313 (1%)

Query: 3   EIRTQVQFIDIDEDMAGQRIDNFLRNQLKNIPKSVVYRILRKGEVRVNKKRVKAEYKLEA 62
           E+R  VQ++ +DED  GQR+DNFL  QL+ +PKS++YR++RKGEVRVNK RVK + ++  
Sbjct: 34  EVRQGVQWVTVDEDNEGQRVDNFLLAQLRGVPKSIIYRVIRKGEVRVNKGRVKPDSRVRT 93

Query: 63  GDVVRVPPVTVEVKENEPAPPSTKLSKVAELEHCIVYEDDHLLILNKPSGTAVHGGSGLH 122
           GD VR+PP+T + K ++ AP S ++  V  +E  +V+E++ +L++NKPSG AVHGGSGL 
Sbjct: 94  GDQVRIPPITRKEKPDQVAPGS-RVQGV--MESAVVFENEQMLVVNKPSGIAVHGGSGLS 150

Query: 123 FGAIEALRALRPQARFLELVHRIDRDTSGILLVAKKRSALRHLQAQFREKTVQKYYYALV 182
           FG IE LR+ RP A+FLELVHR+DRDTSG+++VAKKRSALR+LQ + R+K ++K+Y+ALV
Sbjct: 151 FGLIEVLRSARPTAKFLELVHRLDRDTSGLIMVAKKRSALRYLQDELRQKRIRKHYHALV 210

Query: 183 MGHWDAECKVVNAPLLKNEV---NSIVRVNPNGKPSETRFRILEKFAEATLVQASPVTGR 239
            G W A    V+ PLL+ E+      V+V+  GK S T FR LE +A  +LV+ASP+TGR
Sbjct: 211 AGDWPASVDRVDVPLLRYEMPNGERRVKVDAAGKASLTTFRCLEHYAGYSLVEASPITGR 270

Query: 240 THQIRVHTQYMGHPIAWDDRYGDRRFDAYTAQFGIERLFLHAANIQFVHPASEKKLEIHA 299
           THQIRVH+ + GHPIA DD+Y D          G +RL LHA  ++F  P S + + + A
Sbjct: 271 THQIRVHSAWAGHPIAGDDKYMDDVSLKAFRSIGGQRLMLHARALEFTLPVSGEAMRLEA 330

Query: 300 PLEAHLEQALTKM 312
           P +      L K+
Sbjct: 331 PYDDAFNDVLRKL 343